Detailed information of aflo_s1335.g1.t1 in Acropora florida

Genomic Location: sc0001335_pilon:1...19670
NR annotation: XP_029204626.2, zinc finger CCCH domain-containing protein 13-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5HZP1Ribonuclease H2 subunit B OS=Xenopus laevis OX=8355 GN=rnaseh2b PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09468RNase_H2-Ydr279Ydr279p protein family (RNase H2 complex component) wHTH domainDomainInterproscan
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF17745Ydr279_NYdr279p protein triple barrel domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR019024DomainRibonuclease H2 subunit B, wHTH domainInterproscan
IPR040456FamilyRibonuclease H2 subunit BInterproscan
IPR041195DomainRnh202, triple barrel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13383RIBONUCLEASE H2 SUBUNIT BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0032299Cellular Componentribonuclease H2 complexInterproscan

TOP