Gene detail

Detailed information of aflo_s1355.g2.t1 in Acropora florida

Genomic Location: sc0001355_pilon:6892...15458
NR annotation: XP_015747881.1, PREDICTED: uncharacterized protein LOC107327651 isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aflo_s1355.g2.t1

TTTTCTTTTGTGCAGAATTACGCATTGAAAGTGAAAGTGATAAACAGTTTTAGCGCTGAGTCTGCCGAGTTCTTAAGTTGTAGAGATGGTGAATTGATCACGCTGATAGCTAAGGATTGTCACAGGAAAGATAAAACTGCTTGGCTTGGGGAAACGGAAGACCGGAAAATTGGATTTTTCAACAGCGAAAACGTTCAAGAACAGTTTAATTATGATAGTTTGGATGaacttactggcaacggcagagccttgtgtcagacaaggcatcaatgacatcttgctggataatccgaacaatgaaaccaatttggataacttgttatcatggctcgtttcagtgcacaacatccgatctgatgccaaccaaagccttgaaaatcaaggaacgaagcagccctgcctacggccgccagtgattatcgttggaacacattcagatcagccttttgaagacgtggagacaacggaaaggctcatcataaagaatattttagacaaggcgtatgtcaaacacatcatgacgccgttttttgctgtcgataacaggacggaaaacgacgaaggtgtgcaaaagctacgtcagagaatcatggaagtattgaaagatgaaccctacatgggtgaagaagtaccactgaggtggttcaattttgaaaaggctgttgatgctcttgtggctaagcaaacatacttcatgaatctcgatcaacttggctctgtcatgcgacaagtttgccatatcgatgacgaggaagaaatgacagctatgctgaatttctatcatgatctcggtgtgattgtaaagcatggtcgtactgtggtgctgcaggctcaatggctgatcgacctgttcaagcaacttataaccgtgcggcctttttacgaggctcatcctttgtacttggagtgttggaaagaactggaagaaaacggaattctgaggatagctcttgtcgaccatgtgttttctgagttcatccagaaaggccttttaaagcaagatattctggatatgatggagctatatggattgatcgccaaattttcagttgccactaatgaaaatggagcagaacaaaaatattttgttccgacgcagctgagatcatccccatctggtctgtacgagatcaagccgtctgaatgcgatccgtgcccattgattctacattttctcgatggttttgtaccgcatgggctcttccctcagcttAGCGAGGAGCCACAAATGTATAATTCAGAGGCAGTGGgtgttgatgaaagttccttatttaagcctggaactccttcacaggatgatgttctcctcattgcacatgagcttggttcttcgtggaagatggttggccgagtgctgaaagtcccggatgctgcgattgatatgattgaagaagaggcatgtgaagtctctgaaaaatgctataGGGTACTAAGGCGTTGGCGAGAGATGAACGCGTCTGATGCAACATACCAATGCTTGGCACGGGCATTGCAGCATCCCACTGTTGATAAGTCAAATTTGGCTGCCAAATTCTGCGGTCTTCAATTTTGTAACGAGGCAGCGGTGGCTAAAGATTGTTAACAGCACATGGCGTAGTTCCGGAGCAATTTTTTTCCCTGGCCATACCTGTCAAGATTTTTCGCTGATGTGACCACGTGACCCCAAACGGATTGTTCGTGACAAAAAAACAGAGGCCTGGGGAATAGGCAAAACAGGACAGAGCGAAAGAAGACATGATGAACATTTGAAGTTCTTCGGAGCTGGATTAGTTAATTCTTTTCATAAACCATCGCACCCCTTGCATTGGGGTTATCCAAAGATTTTACTTTACAAACCGTGCTCTGTTCTCACACTAAGCGAAAAACGCCCAGTGTGCCCGCTGTAGCGATGGCGAAATTCGCTGGTGATCAAAATCACCGCGATTTGCGTATGAAATCGCTTTTGTGTCAGCGGTATTCGGAGACGCTTGTACCTAGGATTCCGCAGGAAAATATTTTCCGGATTCTGGTGGGGCACAAAAGGAATCATAAATGATGTAGGAAAGGCAAAAAAGAAGATCATAGTTTTTAGAAAATTATTCTGTAGCATTTTTGTATAATTTTCTTGAGGAAGGTATGGCTTTAAGCAATAAAAATAAGTTTAGTCC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47508	SAM DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan