Gene detail

Detailed information of aflo_s1819.g1.t1 in Acropora florida

Genomic Location: sc0001819_pilon:4842...11708
NR annotation: XP_029208140.2, uncharacterized protein LOC114971737 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aflo_s1819.g1.t1

GTCTCCACGTTCCTTAGAGGTAGGGGTCTCCCTGAAAGTGCAGTTAGATGTTTCAAAGAACAGAAGATGGATTTCAAAGCAATTGCAATGTCTTCATACAGTGATCTCCAAGAACTTGCTGGTTGTGTGAGGGGTGATGCAATTCATATCAAACACTTTGCAGAGAAAAAACTTGAAGAAAAACAGAAAGCAGAGTCTTACCAGCAAAAGGTTCAACTGCTAGAAGAGACACTGCAATTTGGAAGTAAAAACCGCTCAAAAGCACAAAACAAGCAGTCTGTAGAAAAGGGCAAACCTATCAGAGAGGCTACACGCAAGGTCACCATTGGATGGCTTCACTTCAATGATTCATCAAGAAGTTATGTTCAGATACAAGACGAGGGCAATTTCACTCTAGAGAAGTACATTGATGAATATAAGAGAAAGGAAGTCAAATTTTTCATTGCAAGCAGGAAAAAGAGTTTCCAGTCCTGTGGCCTTGCAATACACTCTCATTCAGAGGATGATGATGAGGATGATTTAATGAAGTCTGCTTATCTTGATGACCTTTACAATGACCAACTTGGCTGGAATTTCATGGAGGATGGAATTGGAATTGTTGCCCCACAAAACAGCGATAATGATGACAAATGCAATAAGCGTACAAAACAAAATGTGCTCATGGAGGAAGAGGAGAAAGTGAAAAGACAGGTTGCACTTATGGAGGCAAGAAGAGCCAGAGTTCCAAAGGAGCCTTGTGAAGGAGAAGAGAAGGTAGTCATACGAGTGCGCCACATTACTCAAGGGATTGTTGAGCGTGCCTTTTCACCTAATGCGTTCATGAACTCAGTCTATGACTGGGTTGGCTCTTTGAACCTTGTCCCTGAGGAGTTTGTGCTCTCAGATTTCAAATATGATCTCCTGCCATCAGAAAGTGTAAAATCATGCAGTTTTTCTGTTCTAAACATGACAACATGTTCAGACATGCCAACTTTGGATGATGAGGTCAATTTTAAAGGATTTGGAGGTTATGAACTTGAAGAGAGTGCTTCCAACAACAACCTGAATGAAGATTCTCCTGTCACCAGCTTGCCTAGTTCAGCATCCAAAGCACCAACTGTTCACACTCAGCTTATGGAGGATGATTCAAGCAGCACTGATGAAGAGAAACTTCAGTCTTCAGAATGCAGTAGTAATGACAAATGTGGGTCACAGGAAGAAAGCCCTGGAAGGCGTTTTCGGATGTCGTTGTCCTCGTACACTAGTGATCAGTTAGATTTACCTGAGGAAACTCTCCCCCATTGCCGTAGAATACAAGTAGCCTGCTCCAATGTTATTTCCGACATGATGGAGCTCTATGAGGACAAGACCATTCTGCAATGCAAATTGAATGTCCAGTTTAAGGGAGAGGTGGGGCTGGACTTTGGAGGACCCACAAGGGATTTGTTTGCATCTCTTTGGAATGCTGCTTATGAGGAGTACTTTGAAGGGGACACTGTGAAGGTTCCTTTTTGCCCACCTCATCATCTAATACAAATGAGAACAGTATTTCAGAAGTTTGGGAGAATCCTTTACCATGGATGGCTACTCACCAAGGAAATCCCAGTTCGTTTCTGTGAGGCATCTTTTGTTTGTTTACTTCATGGAGAAGAGTCTGTTGATGAAAGCATGCTAGAGAGGTGTTTTTTACTGTATTTGAGCCAGTATGAAAGAGATATGCTGACAAAAGCACTTTCAACAGAGCTGCTAGCTACTTACCAACAAGACGCTATACTTGGGTTGTATGAACAGTACAACATTACCTGTGCTGTGGCAAAGACACAAGAGCAGCTCCGAAATCATGTTATCATGATGGCAAGATCTCATTTTCTGTACAAACCTATGTCTACATTGATGTGGATGGCTAGTGGTATCTCGGGAAATGAGTTGGAAGCCTGGCGGAGAAGTTTACAATTGGATAAAATAAAGAAGTTGTATGAGGCTTTGCTGCCATCTGTTGAAAAAACCCTGGCACAACTTTATTACCCTAGTGACCTGAGACCAGGTGAGAGTAGAGTGCTGTCATATTTGAGGAAGTATGTGGGTTCCATGGATGATCAACTGCTGGACAGATTTTTACGCTTTGTAACAGGCTCTCCAGCTGCTCCACAGAAAGCTATTGAAGTTGCTTTTCATGCAACTGTTGGCCTGCGACGCTGTCCATCATCCTCTACCTGCTCAAGCACCTTGTTTCTTTCCACAACATATTTGTCATTTACAGAGTTCAAAAAAGGAGTTCAATATTGTGTTAGCAGAGGATACTTCTTTTGA

Transcript

aflo_s1819.g1.t1

AAGTCTCCACGTTCCTTAGAGGTAGGGGTCTCCCTGAAAGTGCAGTTAGATGTTTCAAAGAACAGAAGATGGATTTCAAAGCAATTGCAATGTCTTCATACAGTGATCTCCAAGAACTTGCTGGTTGTGTGAGGGGTGATGCAATTCATATCAAACACTTTGCAGAGAAAAAACTTGAAGAAAAACAGAAAGCAGAGTCTTACCAGCAAAAGGTTCAACTGCTAGAAGAGACACTGCAATTTGGAAGTAAAAACCGCTCAAAAGCACAAAACAAGCAGTCTGTAGAAAAGGGCAAACCTATCAGAGAGGCTACACGCAAGGTCACCATTGGATGGCTTCACTTCAATGATTCATCAAGAAGTTATGTTCAGATACAAGACGAGGGCAATTTCACTCTAGAGAAGTACATTGATGAATATAAGAGAAAGGAAGTCAAATTTTTCATTGCAAGCAGGAAAAAGAGTTTCCAGTCCTGTGGCCTTGCAATACACTCTCATTCAGAGGATGATGATGAGGATGATTTAATGAAGTCTGCTTATCTTGATGACCTTTACAATGACCAACTTGGCTGGAATTTCATGGAGGATGGAATTGGAATTGTTGCCCCACAAAACAGCGATAATGATGACAAATGCAATAAGCGTACAAAACAAAATGTGCTCATGGAGGAAGAGGAGAAAGTGAAAAGACAGGTTGCACTTATGGAGGCAAGAAGAGCCAGAGTTCCAAAGGAGCCTTGTGAAGGAGAAGAGAAGGTAGTCATACGAGTGCGCCACATTACTCAAGGGATTGTTGAGCGTGCCTTTTCACCTAATGCGTTCATGAACTCAGTCTATGACTGGGTTGGCTCTTTGAACCTTGTCCCTGAGGAGTTTGTGCTCTCAGATTTCAAATATGATCTCCTGCCATCAGAAAGTGTAAAATCATGCAGTTTTTCTGTTCTAAACATGACAACATGTTCAGACATGCCAACTTTGGATGATGAGGTCAATTTTAAAGGATTTGGAGGTTATGAACTTGAAGAGAGTGCTTCCAACAACAACCTGAATGAAGATTCTCCTGTCACCAGCTTGCCTAGTTCAGCATCCAAAGCACCAACTGTTCACACTCAGCTTATGGAGGATGATTCAAGCAGCACTGATGAAGAGAAACTTCAGTCTTCAGAATGCAGTAGTAATGACAAATGTGGGTCACAGGAAGAAAGCCCTGGAAGGCGTTTTCGGATGTCGTTGTCCTCGTACACTAGTGATCAGTTAGATTTACCTGAGGAAACTCTCCCCCATTGCCGTAGAATACAAGTAGCCTGCTCCAATGTTATTTCCGACATGATGGAGCTCTATGAGGACAAGACCATTCTGCAATGCAAATTGAATGTCCAGTTTAAGGGAGAGGTGGGGCTGGACTTTGGAGGACCCACAAGGGATTTGTTTGCATCTCTTTGGAATGCTGCTTATGAGGAGTACTTTGAAGGGGACACTGTGAAGGTTCCTTTTTGCCCACCTCATCATCTAATACAAATGAGAACAGTATTTCAGAAGTTTGGGAGAATCCTTTACCATGGATGGCTACTCACCAAGGAAATCCCAGTTCGTTTCTGTGAGGCATCTTTTGTTTGTTTACTTCATGGAGAAGAGTCTGTTGATGAAAGCATGCTAGAGAGGTGTTTTTTACTGTATTTGAGCCAGTATGAAAGAGATATGCTGACAAAAGCACTTTCAACAGAGCTGCTAGCTACTTACCAACAAGACGCTATACTTGGGTTGTATGAACAGTACAACATTACCTGTGCTGTGGCAAAGACACAAGAGCAGCTCCGAAATCATGTTATCATGATGGCAAGATCTCATTTTCTGTACAAACCTATGTCTACATTGATGTGGATGGCTAGTGGTATCTCGGGAAATGAGTTGGAAGCCTGGCGGAGAAGTTTACAATTGGATAAAATAAAGAAGTTGTATGAGGCTTTGCTGCCATCTGTTGAAAAAACCCTGGCACAACTTTATTACCCTAGTGACCTGAGACCAGGTGAGAGTAGAGTGCTGTCATATTTGAGGAAGTATGTGGGTTCCATGGATGATCAACTGCTGGACAGATTTTTACGCTTTGTAACAGGCTCTCCAGCTGCTCCACAGAAAGCTATTGAAGTTGCTTTTCATGCAACTGTTGGCCTGCGACGCTGTCCATCATCCTCTACCTGCTCAAGCACCTTGTTTCTTTCCACAACATATTTGTCATTTACAGAGTTCAAAAAAGGAGTTCAATATTGTGTTAGCAGAGGATACTTCTTTTGAAATGGGAACACTGTAGTATTCTGACAATCTTAGTATTGCTTCAGATTGCTCGCTCGAGCCAAACTGGGTTCAAAGATCCTATTTGCTTGTTTAAGGTACAGACGGAGAAAGGTGTCTCGATAGACCATTATATTGTGCCGTATTAATGTTACTCATGGATCGATTGAGTGAAAGACATGTTCTGTAATTAAGTTGTAGCCCAAAAGTGTATAGATCATGTACCTGTCTACAAGTCGTGTTTCAAAACTTCCCTAAACCAGCTTGAACTGTAGCTCAACTGCAACATTTTAAAGTGCACCTGCCTCAAAATAATGAAAGGTACAAGTCAAATTACTGATACATCATTTTAGTGTTTTGGATTCCAATTTATCTTGACCATGAAAAGCATTTTTGTGGTTAGGTGCACTCAATAGAACAGGCAAATTCGATTTTCGTAGGAGGACATTCATGTCGAAAAATAGAAGGCTAGCATTTCTCATTTGAATGTTGAGAGAACAAAAGCTAGTCTTAAAA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR000569	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan