Detailed information of aflo_s2013.g1.t1 in Acropora florida

Genomic Location: sc0002013_pilon:1...9305
NR annotation: XP_015757556.1, PREDICTED: splicing factor 3A subunit 1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2VDN6Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1
Q15459Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1
Q8K4Z5Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12230PRP21_like_PPre-mRNA splicing factor PRP21 like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045146FamilySplicing factor 3A subunit 1Interproscan
IPR022030DomainSplicing factor 3A subunit 1, conserved domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15316SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0045292Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0071004Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

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