Gene detail

Detailed information of aflo_s2078.g2.t2 in Acropora florida

Genomic Location: sc0002078_pilon:5146...25226
NR annotation: XP_044184391.1, cAMP-dependent protein kinase type I-alpha regulatory subunit-like [Acropora millepora]
Species abbreviation AFLOR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

aflo_s2078.g2.t2

AGACCACGTTGCGCGGTTAGATGTCCCGCTGAATTAGGAAGCAAAATTGGGTTTTTCTTATGAAAACTGAAGTGTAAAAAAAATATTGACAATGAAAAAAGAAAACGAGAAAAAACGACGCAAATTACAAGATGCATGTGATGAGGACAACAGAGACATTGTGAAAAAGAAATCCCGCAAAGAAAATGGAATATCTCATGAAGAAACGGAAGAGATATTTGCAGGAAGCTATAAAGATTCCAAGAAAGTAGAGACACCAGTTCTTTCCAATGGAAAGAAACGGAAGAAGAGAGTACAAGAGAATGATTATGAAAAGGAGCATACTTCTGATGGAAAAGAACAATCAGCCGAAAAATGTAATGCAAAGGCGAAGAAACTAAAAGATGAGGCTGTCAACAGAGAaaagagaagcaaaaagaaagaaagaaacaaggaaggtgacaaagaTGTTAACACTGTCAATGGCAGGGAAGTAGTTCCTGATATGAGCCAAAATTCTTTTgacaagaaaaataggaaaagaaaagaaaCAGCTGGTGCCGAAATCACAGGCGAGAGCAATGAAGTTACAGAGACACCAGAAGATGATCAAAGATGTTTAAAAGATGTAAGACGGTGGGCGACTATATGGCATACTCGCATGACCTGTATGCCTGTTATGGGATTTACCCTCGGTTCCACATTTGCTACCAAAATGGCGTCAAAAAAGGAGGATGGAGACGCAGAAGCGTTAAGGCAGTGCGAAGTTTATGTTGAGAAACACAATATTCAAGCTATTCTTAAAGACTGTATCGTTCAGCTCTGTATCAAGAAGCCTGATAACCCACACAGGTTTTTAAAGGAGTATTTCGAAAAGCTTGAAAAGGAATATGAGGCAGATTCGCTTGATTACACCGAACCTGAGCAGAAGCATGAAATTGAAGATCATCCAAGTCTTGGCAAGGGCTTTTATCTTCGACGGCGCTATGCCGTAAGCGCTGCGCCAATGACGGAGGAAGATGCGACGTCCTATGTGAAAAAGGTGGTACCTAAAGACTACAAGACTACGGCTGCCCTTTCGAAGGCTATTGCCAAGAACATCCTGTTTTCTCACCTGGACGAAGGAGAAAGGAGTGATATTTTTGACGCTATGTGTCTGGTGAAACACAACGCTGGGGAGACTGTGATTCAGCAAGGTGACGAGGGAGATAATTTTTACATTATTGACAGCGGAGAAGTTGACGTATTTGTCAGTGATGAGTATGTCTCAACTATTGGAGAAGGAGGTAGTTTTGGGGAACTGGCTCTGATCTATGGCACTCCAAGAGCAGCTACGTTAAAGAACCTGACACAGTCAAAAACTGATGTGAAGCTGTGGGCCATTGATGGATCAACTTACAGGCGCATTTTGATGAGAAGTCAGATTAACAAAAGAAAGATGTATGAGCAGCTTCTGGAGAAAGTCAGTATTCTTGAATCCCTTGACAAGTGGGAACGGCTGACGGTAGCAGATGCCCTGGAAGCTGTCACTTATGAGGACAATGAAAATGTTGTAGTTCAGGGAGAACATGGCGATGAATTTTTTATTATTGTTGAGGGAGTTGCTGTGGTTCTGCAGCGCCGTTCTGTAAATGAAGATTTCATTGAGGTCAGCCGTTTGGGACAATCTGACTACTTTGGTGAGATAGCACTGGTCTTGAATCGACCCCGTGCAGCAACAGTAAGAGCGAAAGGAACCCTGACATGTGTTAAGCTTGACAGGCAAAGGTTTGAGAGGGTACTGGGTCCATGCATTGACATCCTCAAGAGAAATATACAACACTATAACAGCTTTGTGTCATTGGTGGTGTGAAAAAGGTTATGAACTTGGAATTAAAAAGAATGTGATTATCTGAGTGCTTTAGAAGGGAAGAGCATTGTTTCAGATATTGTAAGTCTATCCCAGTATTTTGGTGATGGTGGGATGACAGTAAAGTTATGAACAACTTCTTTTTATTAGACGGCTACCAAAAAGTCCAGAACGAACAACAAAGTTAAGGCTTTTCCTTTCTTTTGGCAAGTTCTATTTATTTGAACAGATTAACAGATCTTCAGTGTATATGTATAGATTTATTCTTTCATCCATAATATTTACTTGACAAAGAGAAACTTTAAAAGTATAACATAAAAATTTTTATTTAATTTATTTATTAACTGTTACATTAAACTTGTACCATTGTAAACATGTACTTTATGGTCTCAACAAAGAATTTTCAAAACGTTGATTGTAATAATTATTAAGCACATTACCTTTTATTTCCAACTCTTATAAATTATATGCTGTTCAATAAAGAAAGTGTACAGAGGAAAAAATACAGTGTGCTCTGTTGGTTTAAGGTTTACAAACTGACAAAGACTCGAAATACTGCATTAACTTACATTGTGAGTATTCAAGTTATTTGCCAAAATCCCAGGGAACACTAGGTATAGTTCAGCAACTTCATCAAAATGTCGTCTTTTTAGTCACTTTGGTATATTAATTCAATCTGGTTGTGCAGGTGGTTCCCTTTGTTTTGTCCCTACCACTGATGAATCATTGGTTGAGGGGGGAAGACCTCCAATGACCATTGTAGTGGCTGATGAAAACAGGAGAAGCACACAACACTCATTCACATGCCTTGCAACTGACCACAGCAGTTACTGAAGGACACCATTAAAATGAttacaataat

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZM91	cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Gallus gallus OX=9031 GN=PRKAR1A PE=2 SV=1
P10644	cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Homo sapiens OX=9606 GN=PRKAR1A PE=1 SV=1
Q5REL1	cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Pongo abelii OX=9601 GN=PRKAR1A PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005610 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00027 all species →	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan
PF02197 all species →	RIIa	Regulatory subunit of type II PKA R-subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018488 all species →	Conserved_site	Cyclic nucleotide-binding, conserved site	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR000595 all species →	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR003117 all species →	Domain	cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain	Interproscan
IPR050503 all species →	Family	cAMP-dependent kinase regulatory chain	Interproscan
IPR018490 all species →	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11635 all species →	CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for aflo_s2078.g2.t2. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04739	PRKAR; cAMP-dependent protein kinase regulator	-	Insulin signaling pathway	ko04910	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.