Detailed information of aflo_s3895.g1.t1 in Acropora florida

Genomic Location: sc0003895_pilon:1...3098
NR annotation: XP_029186952.2, probable ATP-dependent RNA helicase DDX31 isoform X1 [Acropora millepora]
Species abbreviation AFLOR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IBN8ATP-dependent DNA helicase DDX31 OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=DDX31 PE=1 SV=1
P36120ATP-dependent RNA helicase DBP7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP7 PE=1 SV=1
A5DAR2ATP-dependent RNA helicase DBP7 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP7 PE=3 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005647 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270
all species →		DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014014
all species →		DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR050079
all species →		FamilyDEAD box RNA helicaseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545
all species →		DomainDEAD/DEAH box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47959
all species →		ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003724
all species →		Molecular FunctionRNA helicase activityInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for aflo_s3895.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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