Gene detail

Detailed information of agem_s0001.g225.t2 in Acropora gemmifera

Genomic Location: sc0000001_pilon:3877560...3888400
NR annotation: XP_015770963.1, PREDICTED: cyclic AMP-responsive element-binding protein 3-like protein 2 isoform X2 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0001.g225.t2

CTAGAAAGGGTGAATGAGTTTGGTCGGAGTGTAGTCCTGTGTTTCTTCTCCTCCTCTTCTCTTAACAGCCGATCATGGAGCATTCCTCTTTGGATTTAAGCATTGTAAAAAAGGAACCAGGCTTTGTTGAACCATTTTCGTCAGAATCTGGCCTTTTCGATAACATGATGTCCGATGACTTTCACGATTCAAACTTTCATTCATTGAACCACAGCAACGAAGAGGTACCCGTGGACTGGCTATCACGATTTTTTGACGACGTTCCGGCTTGCGCTGACTCTTCGCTGAGTTACAACAGTTTGCCTGAGTACACTTCAAGCAGTTTATCGTGCTCTACATTTGGAAAATCACATTATCTTAATTTGAATGGCCTTAGCATGGATAGTATGCCCAGTTTTCCAGAGGAATGCGCCAATGAATCGCTGTATTGCTCACCGCAATCAGCTCCTCAAACTCCAGACTATAAACCTCTTTCTCCAGATTCTTTAGGGTCCTCGCATTCACTTGAAGCCGATGTGAAACCTCCTCTATTTTGTAAGGACCCAATATTTGACGTTCAAGAGGGCTTTACCTCGCAGATGAACAGTTATATAGAACCGGAGAATTTAAAAATGTTCGAACAGAGTGAGATACGAAAAAGTTCACCGGATTCGCCGCATTCTGTAAACGATCGCGACTCGGATCGACTTGACAGCGAGTCAGGTTATGATTCAGGTTCTCATTCACCAACATCATCATCCACTACTCCACCACACGTGCTAGAAGATAATGATGTGTCTGTAACACAGACAGGAGGAACAACACCACCAGTTATACAGCGCCCTCAAGAAAAGCAACCTTTCTATCTAACAGAAGAAGAGAGAAGAACTCTTGTAGCAGAAGGTTTACCTGTACCAAGCAGTCTTCCTTTAACAAAGGTTGAAGAAAGAGCTCTCAAAAAAGTTAGACGCAAGATTAAAAACAAAATATCAGCACAAGAAAGTAGGCGTAAAAAGAAGGAATATATGGAGACGTTAGAGAAAAGAGTAGAGAACTGTTCTTGCGAGAATTTAGAACTTCGGAAAAAGGTGGATTCATTAGAAAGTACAAATCGCTCACTCATAAGTCAACTTCAAAAACTACAGTCAATCATTGCTGCCAAAGTTCCTCGTACTGTCACTGCAAGATCAACTCAGACAAGTACGTGCTTAATGGTGAGTGGTCGTAGTTCTTTGCTTCGCTGTGTTCCTTGGCAGTTGGAGTCCTCTCTCAACAACAGGAATCACTCTACCATCATTTAGTGCATCACCAAGCAAGGGAGCAGTTGATTACAGCACGCCATCAGTCCGCTCCAGAGTCTTGCTGTCAATTGTCGACGAGCTGGACTCGGACGAGTTTATTGAATATGTTCCGTCAAGCAGCATATTTGATGCCGTGGACCAGCTGATGCCCTCTGCACCAGCCAAAGGCCTGGAAGTAGACAATGACGCCAACAGTACCATTTCCTTGGAAACAGTCGCTATGGAAACAAGAAAAAATGAAAGCCAATTAATTGCATCGGCTGCCTGAAGATAAAGTATTGTTTTCAGAAAACTTAAAAGAAGCAAGTTCCTTGCTGTATAATCTTTACAAAAGGGTATTTTAATACGGATAGTATTTGTAGACAATATATTTTGTACCGATAAAATGAGGCTTAAAGGGAATGGATCTCTGAAATACGACAACATGTTCGAAATTCTCCATACATCGTATCGCATTGCGATTTCTTTTCTCTATAACTAGTTTTGCTCGAGAAGTTTTCTTATCGCATTAACAAGTTCTCAACAACAGTTTCGTTTACTTATATCTTTAACCTTTGCAAACAACAAGGGCAGGAGGGGTTTATTTGGCTTCTTGTGAGAAATAAAAAAGGAAAAAGTCACTCTAATGAGCCGCAGATTGCCTTTCTAAGAATGTTAACAACAAGAGCAGAATTCGTTCTATATTAGCAACAGAACGGGCTCTTGGAATCGCTACTCATGGCATTTACAAATTTAGAACGTGGTAAGATGTTTGTTCTCTGTGGTCGTTTGAATATTCTGAATTAATACGTAGATGATATTCCTAACTTGTTATGTAGGTATCTCATTTCGTAAGACCATTAACTAGATGAAGAGCTTAAACACTGTCATGCCACGTCACTGTTAAAGCGGGTGTCCTCAAGTAGATGAATACAATAGGAAGTCATTTCTTTCCTGGTTCTGTTGCTGAAGAAGGAAAGTAGGGGAAAATGACAGCTTTCTGTACATAGATTGTACAAACCTAACCATGGATACTGTTCTCTACATAACCGCCACTAATGTCTGACAATAATTTTAATAAGTAAGTTTTGTATAAATGACTGTGTCGGGAATAACTTAATTTTTCTCTAATTTGCAGTGGCGAAATTTCGATTATTATGATAGTAGTATTTATATCTAAAAAATAATAATTTTAGTAATAATTCTGGCCTGTGAATGGGACGTTGACTGCACAGATTTCATCAAATTATATATTTTACAGAACTAAGAAATTAGTTTTCAAGTCTAGGTGTGTCCTCAGTTTACAGTATTAAAAATGTTCTCGAAAAATGTACCAGAGGAAGTTAAGAGAGAAGCAATAAAAATGAAAATCGTAT

Protein

Uniprot

Gene family

Uniprot term	Description
Q8BH52	Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Mus musculus OX=10090 GN=Creb3l2 PE=1 SV=1
Q6QDP7	Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Rattus norvegicus OX=10116 GN=Creb3l2 PE=2 SV=1
Q5RCM9	Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Pongo abelii OX=9601 GN=CREB3L2 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00170	bZIP_1	bZIP transcription factor	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR004827	Domain	Basic-leucine zipper domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46004	CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0035497	Molecular Function	cAMP response element binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09048	CREB3; cyclic AMP-responsive element-binding protein 3	-	Transcription factors	ko03000	deepkoala