Detailed information of agem_s0003.g84.t2 in Acropora gemmifera

Genomic Location: sc0000003_pilon:1381907...1393619
NR annotation: XP_015774050.1, PREDICTED: retinal homeobox protein Rx1-like isoform X1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O97670Homeobox expressed in ES cells 1 (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=HESX1 PE=2 SV=1
P53544Homeobox protein goosecoid OS=Danio rerio OX=7955 GN=gsc PE=2 SV=1
P53545Homeobox protein goosecoid OS=Gallus gallus OX=9031 GN=GSC PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45882PITUITARY HOMEOBOX HOMOLOG PTX1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan

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