Detailed information of agem_s0005.g235.t1 in Acropora gemmifera

Genomic Location: sc0000005_pilon:3359965...3371223
NR annotation: XP_015757925.1, PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Acropora digitifera]
Species abbreviation AGEMM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28DX0Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Xenopus tropicalis OX=8364 GN=qtrt2 PE=2 SV=1
Q6DF96Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Xenopus laevis OX=8355 GN=qtrt2 PE=2 SV=1
B3RNT0Queuine tRNA-ribosyltransferase accessory subunit 2 OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_53275 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006042 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01702
all species →		TGTQueuine tRNA-ribosyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050852
all species →		FamilyQueuine tRNA-ribosyltransferaseInterproscan
IPR002616
all species →		DomaintRNA-guanine(15) transglycosylase-likeInterproscan
IPR036511
all species →		Homologous_superfamilyQueuine tRNA-ribosyltransferase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46064
all species →		QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0101030
all species →		Biological ProcesstRNA-guanine transglycosylationInterproscan
GO:0006400
all species →		Biological ProcesstRNA modificationInterproscan
GO:0016763
all species →		Molecular Functionpentosyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for agem_s0005.g235.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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