Detailed information of agem_s0005.g24.t1 in Acropora gemmifera

Genomic Location: sc0000005_pilon:227196...233837
NR annotation: XP_015759266.1, PREDICTED: 26S protease regulatory subunit 10B [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P6233326S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1
P6233526S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=PSMC6 PE=2 SV=1
P6233426S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF16450Prot_ATP_ID_OB_CProteasomal ATPase OB C-terminal domainDomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032501DomainProteasomal ATPase, second OB domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR050221Family26S Proteasome Regulatory ATPaseInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR2307326S PROTEASOME REGULATORY SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0008540Cellular Componentproteasome regulatory particle, base subcomplexInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0031597Cellular Componentcytosolic proteasome complexInterproscan
GO:0036402Molecular Functionproteasome-activating activityInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0045899Biological Processpositive regulation of RNA polymerase II transcription preinitiation complex assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03064PSMC6, RPT4; 26S proteasome regulatory subunit T4-Proteasomeko03051deepkoala

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