Detailed information of agem_s0006.g123.t1 in Acropora gemmifera

Genomic Location: sc0000006_pilon:2171137...2191188
NR annotation: XP_044179171.1, syndetin-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1LSG8Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1
Q96JG6Syndetin OS=Homo sapiens OX=9606 GN=VPS50 PE=1 SV=3
Q8CI71Syndetin OS=Mus musculus OX=10090 GN=Vps50 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10474Syndetin_CSyndetin, C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019514DomainSyndetin, C-terminalInterproscan
IPR040047FamilySyndetinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13258UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:1990745Cellular ComponentEARP complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23288VPS50; syndetin-Membrane traffickingko04131deepkoala

TOP