Detailed information of agem_s0006.g57.t1 in Acropora gemmifera

Genomic Location: sc0000006_pilon:1026391...1038171
NR annotation: XP_029187764.2, LOW QUALITY PROTEIN: collagen alpha-2(I) chain-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21941Matrilin-1 OS=Homo sapiens OX=9606 GN=MATN1 PE=1 SV=1
P05099Matrilin-1 OS=Gallus gallus OX=9031 GN=MATN1 PE=1 SV=2
E1BMV3Matrilin-1 OS=Bos taurus OX=9913 GN=MATN1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13519VWA_2von Willebrand factor type A domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan

TOP