Detailed information of agem_s0013.g32.t2 in Acropora gemmifera

Genomic Location: sc0000013_pilon:583816...614957
NR annotation: XP_029186036.2, LOW QUALITY PROTEIN: scavenger receptor cysteine-rich type 1 protein M160-like [Acropora millepora]
Species Acropora gemmifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UGM3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Homo sapiens OX=9606 GN=DMBT1 PE=1 SV=2
Q9NR16Scavenger receptor cysteine-rich type 1 protein M160 OS=Homo sapiens OX=9606 GN=CD163L1 PE=1 SV=2
Q95218Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002618 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF00047
all species →		igImmunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190
all species →		DomainSRCR domainInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR006212
all species →		RepeatFurin-like repeatInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR050686
all species →		FamilySRCR-S1 Scavenger ReceptorInterproscan
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR013151
all species →		DomainImmunoglobulinInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071
all species →		SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for agem_s0013.g32.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP