Gene detail

Detailed information of agem_s0016.g200.t2 in Acropora gemmifera

Genomic Location: sc0000016_pilon:2432384...2441351
NR annotation: XP_029201920.2, tRNA pseudouridine synthase Pus10-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q3MIT2	tRNA pseudouridine synthase Pus10 OS=Homo sapiens OX=9606 GN=PUS10 PE=1 SV=1
Q9D3U0	tRNA pseudouridine synthase Pus10 OS=Mus musculus OX=10090 GN=Pus10 PE=1 SV=1
Q6ING2	tRNA pseudouridine synthase Pus10 OS=Xenopus laevis OX=8355 GN=pus10 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21238	Pus10_C	Pus10, C-terminal	Domain	Interproscan
PF21237	Pus10_N_euk	Eukaryotic Pus10, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020103	Homologous_superfamily	Pseudouridine synthase, catalytic domain superfamily	Interproscan
IPR039894	Family	tRNA pseudouridine synthase Pus10-like	Interproscan
IPR048741	Domain	Pus10-like, C-terminal	Interproscan
IPR048742	Domain	Pus10, N-terminal, eukaryotes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21568	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001522	Biological Process	pseudouridine synthesis	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0009451	Biological Process	RNA modification	Interproscan
GO:0009982	Molecular Function	pseudouridine synthase activity	Interproscan
GO:0031119	Biological Process	tRNA pseudouridine synthesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07583	PUS10; tRNA pseudouridine synthase 10	EC:5.4.99.25	Transfer RNA biogenesis	ko03016	deepkoala