Detailed information of agem_s0016.g37.t1 in Acropora gemmifera

Genomic Location: sc0000016_pilon:633607...642720
NR annotation: XP_029189815.2, retina and anterior neural fold homeobox protein 2-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3LU38Homeobox protein prophet of Pit-1 OS=Alouatta belzebul OX=30590 GN=PROP1 PE=3 SV=1
Q9GLL9Homeobox protein prophet of Pit-1 OS=Sus scrofa OX=9823 GN=PROP1 PE=2 SV=1
Q3LU39Homeobox protein prophet of Pit-1 OS=Gorilla gorilla gorilla OX=9595 GN=PROP1 PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050649FamilyPaired Homeobox Transcription FactorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24329HOMEOBOX PROTEIN ARISTALESSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09334ALX1, CART1; ALX homeobox protein 1-Transcription factorsko03000deepkoala

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