Gene detail

Detailed information of agem_s0017.g147.t1 in Acropora gemmifera

Genomic Location: sc0000017_pilon:1930153...1932951
NR annotation: XP_015749070.1, PREDICTED: glycogen-binding subunit 76A-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0017.g147.t1

TACCAGATATACTTGGAACAGCACACACCAACTTTGTGTCTGCGGGAAATATCTACAGCAACTCACTGAGGAAAACTTGTCCGCTGCCCAAAACAACAACAGAGGAGAGATGAAACTATTGTGATATTTTGGGCACCATTGTAACGCGAGTCACAGACACTGACGCATTGGATCACGAATGAGCGTTGAACTTTGGCCATCATATGAAAAACAAACAGGGATGAAGACGGATGCTCAACAGGCAAGCTCCATGCAAGATAGTGCAACGCCGGGCTCCAAAAGAGTTTGCTTTGCAGATCTCGTTGGCCTCAAACTCGAGTTTGTCAAGACAATAACCCCATGTAGCAGCGAGGACAATTTGACCGCATTGGCCGGTGTTGTCAGCGCGTGGAAACGTACGCACTACGATATCAACGGCAATGTCTCCCTTGGACCGCGGACGAAACGTCTCATGCCGTGCTTTAGTCCTCCGTCGAAATCGGACGGTTTTATGAAGCGAGTCTTTGACCAAAATGTCTGTCTAGAGAACATTGCCTGCAAGGACTTTGTTGTTACAGGAATTATTCGAGTAACGAATTTATCATACACAAAGGAAGTCACTGTTCGTTGTACACTAGATGATTGGGACACTTACCGAGACATTTGGGCTGATTTTATGTCTTCTTGCTCTAACGGCAAAACCGACAAGTTTAGCTTCCGTATCTCTCTACCTTCTGACTTTGAATTGCATCGATACATGCGCTTTGCAATCCGCTATAAAGTCTTGAATCAAGAGTTCTGGGACAACAATAACACAAAAAATTATCATGTACAGTGCCTATAGGTGTAAAACCGTCTCTGCTCGAATAGTTTTGGACAAGTTTGCGGGAGAGGAATCGATAATAAAAAGGCAGTGGTTGTTTTGCTAAGAAAGATTTGTTGGTGTACTGAGTCCATTTTGTCACCGTGACTGGAAAAAACTCTGAGTAAATCAGCGTTTTCTGGACGTTTTTATAATTACCTACAGAAACGTGTAAAAACGTTCTGATCTTCAGTTCCAATATCAAACGGCGAGTGCCATGAACTAGAAAGGCACGAACATGATCATTGCGAAAAAAAATGGAAAATAAACTTTTGTTTTTCTTCATAGTATTCCGGTGAATGGCAAACGTGTTTTCGGAACGATATCACAGTGAACATTTACGGAGGTAAATATAACTTAATATGAAGAGAAGTCGACAACAAACAACTCAGTTTTCGCCTCCAAGCAAAGCAAACTCCAAATCTTCAGTGAAAAACTGGTTTCTTGTCATTTGTAGAGTTGAAATTGCCTGCTCTCTGAAAAACCGAAGGAAGACCTTTCTGGATTAAGGACAAAATGTAAAAAATAAACGCATTATTTTGTTGGAAAATGCAAATGATGCATCTTAAAATGTTTCTTAGTTGATTTCGAGCAATGTGTAAGGAGAAATTGCGGTTGAAAATGAAGTTTCGTTTAATCCGACGACGTAATGAATTTCCCAGTGACAAATAATTTTTAATAATGAATCATCTTAATGCTTAAATGAAACTGATTATACAATCAACGGAACACTGAGGTGCGAGAAAAATTTGCGGAATAAACTAGGAAACAGAAAAGAAAGCATATTTTAGATCGTGTTCAGTCCTTTATTAGGCTGTTAGGAAAATACGTTATCTTACGCTCTGCCTTATTCTCAGAAAGCTGTCATATACCGTCAATACAAATTACAAATAACGAACACAACGAAGGATGGAACAATCCCTGAACATTCAGAACCGTATATCCGGCATAAGGACTCACAAAGACAGTTCCTTCGTTTTTGCGGTTAAAAAATATCGCCACATCCTTTCTTCACTGAGCATGAATTTGCAACCAAAGCAACCGAACGATGTTGGCCTGACGAGATTTACAGCTAAGAATGCacaacaacaacaacacacaagagcaaTTAATAGCCTTTGTTGGTTTCCCCAATTGTTCTGTCTTGGAAACACGCTTTTAATATTACTATCAACTTTCAAAACCGGGTTAAAAGATTCTAGAGAGATCATAGCACTGACTTTATTCCGTAAAACTGGGCATTCACAATTTATAAAAACTGAAAATGATCTCTGAACGAGTGTCAGAGTGGGGTGAACCTGACAGCTGAAAAATTAAGACTCAAACATGACTGTCAGCTGGTCGTGATAAATTCATGTAGAGATAGGCCTTGAGAATTGCTGTCAAAAAGAGCCAGTCTAGTTTGTTTTTGTTCAAAAAACTTCAGCAAGAACGAATCAAGAATATGTTCACCAAGATTCTGAAGAAACGAAAAACTGATTACTTGGCCTGTGTGTATTTATTTATTTATCATTttatttatttaatcttaatttatttaaccacggtacaattcaccagcaatatatgaaaatatgtgtgtacaattaaaattataaaccaagtatagttaaaactactcaattgcattcactatcctttcctaatatcataaaatgaaagctgctttccatgaatgccgtgtatcaaatgacggcttagataatcgtttgaattggttgacggactctgcttccctcagttccaaagacgacctgttccaCAAAACTGCggaa

Protein

Uniprot

Uniprot term	Description
Q6GL23	Protein phosphatase 1 regulatory subunit 3C OS=Xenopus tropicalis OX=8364 GN=ppp1r3c PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03370	CBM_21	Carbohydrate/starch-binding module (family 21)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038175	Homologous_superfamily	CBM21 domain superfamily	Interproscan
IPR050782	Family	Protein phosphatase 1 regulatory subunit 3	Interproscan
IPR005036	Domain	CBM21 (carbohydrate binding type-21) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12307	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000164	Cellular Component	protein phosphatase type 1 complex	Interproscan
GO:0005979	Biological Process	regulation of glycogen biosynthetic process	Interproscan
GO:0008157	Molecular Function	protein phosphatase 1 binding	Interproscan
GO:2001069	Molecular Function	glycogen binding	Interproscan