Detailed information of agem_s0017.g175.t2 in Acropora gemmifera

Genomic Location: sc0000017_pilon:2307407...2318561
NR annotation: XP_044175135.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114959088 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWY9Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
P07996Thrombospondin-1 OS=Homo sapiens OX=9606 GN=THBS1 PE=1 SV=2
P35441Thrombospondin-1 OS=Mus musculus OX=10090 GN=Thbs1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF01822WSCWSC domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00086Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000716DomainThyroglobulin type-1Interproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036857Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR006558DomainLamG-like jellyroll foldInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR051950FamilyDevelopmental regulator and protease inhibitorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12352SECRETED MODULAR CALCIUM-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan

TOP