Gene detail

Detailed information of agem_s0018.g80.t1 in Acropora gemmifera

Genomic Location: sc0000018_pilon:2050954...2071156
NR annotation: XP_029200306.2, uncharacterized protein LOC114964942 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

agem_s0018.g80.t1

ATGTCTCAGGGAAAATTGGAGGATGACGAGGCGATAAAAAATGGAAAATTCTCCTCGCTGGCTAAGGAAACTGCGCACGACTTTTTAGCGGATGGCCGTTGGAAATCAAAACGGGAAGAAGAATTGCATCGTGAGATTGAAACAGTGTCATCTGAAAAAGCCAAACGTTTGTTTGAGGACGAGAAAAAAAGGCGAGCTTGGGTTGTCGCCATTAAAAAGTCTGTGGAACAGAGAATTCAATCGCAAGTTCGTGCAGCCTTAGGAACTCCACCGGAAGAGAAGCGAAAGAAACTCCACGAGAAAAGATTAGCAGAGGAACGACAAAGAAGGCAGGTAGAGAAAGAAATTGCTGATAGACGAAGCACCGCAGAGCGTCGTGTTTACAATCATCCATAAAGTTCTTTTCTTCAAATGTATGCAACAGCTCCGTCAAACATCAGCAGTATCATCTTATTTCTTTTTCTATTTTCCTTTAGCGGCAGTTTTGAATATGACCTGGTCCTTAGTTCTGACCTTTACACCAACCGACACACACAGTGGTATTACTTTCGAGTTGAAAACATGGTCGCTGGTGTCACATACAAGTTTAACATCATTAATCTGCTCAAGAACGACAGTTTGTATAATTATGGAATGAAACCTCTGATGTACTCTGAACGAGAAGCCACGGTCAGAGGACTGGGGTGGAAAAGAGCTGGAACACACATCAGTTATTGCAAGACTTCTTTGTTCAAAAGTCTCTCACTGCATCGTGAAAATGTGTACTACACTCTTACCTTTCACATTGAATTCCCACATGAAGGCGACACTTGTTATCTCGCTCATTGTTATCCGTATTCCTACACTGACCTTGAACTTTACTTGCGAACAATCATGGAAAATCGAAAAACTGTTCAGTATTTCCACAAGGAGGTGCTGTGCAAAACAATGGCTGGAAACAACTGCTATGTGTTGACTGTCACGTCATCCAAAGTTCCTGAAAGCGAGAAGTTAGGTGTTGTCATCAGCGCTCGAGTTCACCCGGGCGAGACTAATGCCAGCTGGATGTTGAAAGGGATGCTGGACTTCCTGACCAGCGGACACTACATCGCAGAGAAACTTCGTCGCAAGTTTGTGTTCAAACTGGTCCCAATGTTGAATCCTGATGGTGTGATTGTGGGCAACTACAGAACAAACCTTGCAGCCAGAGATTTAAACAGAACATATAAAGACCCAAAGAAGGAGAGTTTTCCAACCGTGTGGCACATGAAAAACATGCTGGAAGCTTTCAAGAAAGATCATCAAGTCATCATTTACTGCGATCTGCATGGTCACAGTCGAAAACCCAATGTCTTCATGTACGGCTGCACGGCAGATCCCAATATGGCATCCATGAGTAACTTTATAGAAGAACGACTTTTCCCGTGGATGATGTCACAAAAGGCTCCTGATAAGTTCTCATTCAGTGGTTGTAAGTTTCGAGTACGCAGGTGCAAGGAATCAACCGCGCGCGTAGTGATGTGGCGGCAAATGGGAATTGCGAATAGTTTCACCATGGAGGCTACTTTCTGTGGCGCCAACTTTGGTGACATGGCGAAAGGAAGGCACTTCCATGTGGGAGACTTTGAAGAAATGGGGCGCCATTTCTGTGAAGTGCTTTTGGAATATTCCGAAGCAAAGAGCAGCGATCAAAGCGAAATGACTCAGGCATTCGTCGAACTTGCCTGCAAGATGACGCGTGATATTCTTCGACAAACGCTGGGAAATTATCACCTGGAGAACAAGGAGTTAGTTTGCATACCCAGAGACGAAACATCAGAGCAGATGGAAGGTCAAAGAAGCGATTCTCCGTCCGAAGGAAATCAGGACGATGGCAATAAATCAAGCGAGTTTGGCGTCAAAGCGTTTCCTTCATCCAATGGCAGACCAGTGAGCTTTATGGATGTTCGAGTTGACGCGGTAAAGAAACAGGACGTTGATGTTGAGCTTTCTGTGAAAAGTGTGCATGCGGAATCTTTCAATGATTGTCTCAAGATATTGGATAACTTAAATATAGTGGACCGCTTCGACGAGTCAGATTCCAGTGACTCTGATAGTGACTCCGATGAGTCGGACAGCAAAGCCGATGAGGCGGATCCTAGTGGCAACGCGGTAAGTTTCTGA

Transcript

agem_s0018.g80.t1

CTTTTTGCCAAAAACCACTGCGAAAGAGTGACGAAGACTGAGACCCTCTTGGACAAGAAGATAAAATCACAGAGGAAAGCGGACCAGCTAATTGCATCAGGAGGAGATGGAGTGGCCAAGTGGCTAGGCTGCTGGATCTGAAAGTATTCCATGTGGCGCCCTGGAGTTTTTAAGCAAAATGTCTCAGGGAAAATTGGAGGATGACGAGGCGATAAAAAATGGAAAATTCTCCTCGCTGGCTAAGGAAACTGCGCACGACTTTTTAGCGGATGGCCGTTGGAAATCAAAACGGGAAGAAGAATTGCATCGTGAGATTGAAACAGTGTCATCTGAAAAAGCCAAACGTTTGTTTGAGGACGAGAAAAAAAGGCGAGCTTGGGTTGTCGCCATTAAAAAGTCTGTGGAACAGAGAATTCAATCGCAAGTTCGTGCAGCCTTAGGAACTCCACCGGAAGAGAAGCGAAAGAAACTCCACGAGAAAAGATTAGCAGAGGAACGACAAAGAAGGCAGGTAGAGAAAGAAATTGCTGATAGACGAAGCACCGCAGAGCGTCGTGTTTACAATCATCCATAAAGTTCTTTTCTTCAAATGTATGCAACAGCTCCGTCAAACATCAGCAGTATCATCTTATTTCTTTTTCTATTTTCCTTTAGCGGCAGTTTTGAATATGACCTGGTCCTTAGTTCTGACCTTTACACCAACCGACACACACAGTGGTATTACTTTCGAGTTGAAAACATGGTCGCTGGTGTCACATACAAGTTTAACATCATTAATCTGCTCAAGAACGACAGTTTGTATAATTATGGAATGAAACCTCTGATGTACTCTGAACGAGAAGCCACGGTCAGAGGACTGGGGTGGAAAAGAGCTGGAACACACATCAGTTATTGCAAGACTTCTTTGTTCAAAAGTCTCTCACTGCATCGTGAAAATGTGTACTACACTCTTACCTTTCACATTGAATTCCCACATGAAGGCGACACTTGTTATCTCGCTCATTGTTATCCGTATTCCTACACTGACCTTGAACTTTACTTGCGAACAATCATGGAAAATCGAAAAACTGTTCAGTATTTCCACAAGGAGGTGCTGTGCAAAACAATGGCTGGAAACAACTGCTATGTGTTGACTGTCACGTCATCCAAAGTTCCTGAAAGCGAGAAGTTAGGTGTTGTCATCAGCGCTCGAGTTCACCCGGGCGAGACTAATGCCAGCTGGATGTTGAAAGGGATGCTGGACTTCCTGACCAGCGGACACTACATCGCAGAGAAACTTCGTCGCAAGTTTGTGTTCAAACTGGTCCCAATGTTGAATCCTGATGGTGTGATTGTGGGCAACTACAGAACAAACCTTGCAGCCAGAGATTTAAACAGAACATATAAAGACCCAAAGAAGGAGAGTTTTCCAACCGTGTGGCACATGAAAAACATGCTGGAAGCTTTCAAGAAAGATCATCAAGTCATCATTTACTGCGATCTGCATGGTCACAGTCGAAAACCCAATGTCTTCATGTACGGCTGCACGGCAGATCCCAATATGGCATCCATGAGTAACTTTATAGAAGAACGACTTTTCCCGTGGATGATGTCACAAAAGGCTCCTGATAAGTTCTCATTCAGTGGTTGTAAGTTTCGAGTACGCAGGTGCAAGGAATCAACCGCGCGCGTAGTGATGTGGCGGCAAATGGGAATTGCGAATAGTTTCACCATGGAGGCTACTTTCTGTGGCGCCAACTTTGGTGACATGGCGAAAGGAAGGCACTTCCATGTGGGAGACTTTGAAGAAATGGGGCGCCATTTCTGTGAAGTGCTTTTGGAATATTCCGAAGCAAAGAGCAGCGATCAAAGCGAAATGACTCAGGCATTCGTCGAACTTGCCTGCAAGATGACGCGTGATATTCTTCGACAAACGCTGGGAAATTATCACCTGGAGAACAAGGAGTTAGTTTGCATACCCAGAGACGAAACATCAGAGCAGATGGAAGGTCAAAGAAGCGATTCTCCGTCCGAAGGAAATCAGGACGATGGCAATAAATCAAGCGAGTTTGGCGTCAAAGCGTTTCCTTCATCCAATGGCAGACCAGTGAGCTTTATGGATGTTCGAGTTGACGCGGTAAAGAAACAGGACGTTGATGTTGAGCTTTCTGTGAAAAGTGTGCATGCGGAATCTTTCAATGATTGTCTCAAGATATTGGATAACTTAAATATAGTGGACCGCTTCGACGAGTCAGATTCCAGTGACTCTGATAGTGACTCCGATGAGTCGGACAGCAAAGCCGATGAGGCGGATCCTAGTGGCAACGCGGTAAGTTTCTGATTGGTTAATCAGGAGCAATAATGTTAGCGAGGCTCA

Protein

Uniprot

Uniprot term	Description
A6H8T7	Cytosolic carboxypeptidase 2 OS=Danio rerio OX=7955 GN=zte25 PE=2 SV=1
Q4R632	Cytosolic carboxypeptidase 2 OS=Macaca fascicularis OX=9541 GN=AGBL2 PE=2 SV=1
Q8CDK2	Cytosolic carboxypeptidase 2 OS=Mus musculus OX=10090 GN=Agbl2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00246	Peptidase_M14	Zinc carboxypeptidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050821	Family	Cytosolic carboxypeptidase	Interproscan
IPR000834	Domain	Peptidase M14, carboxypeptidase A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12756	CYTOSOLIC CARBOXYPEPTIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004181	Molecular Function	metallocarboxypeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23437	AGBL2_3, CCP2_3; cytosolic carboxypeptidase protein 2/3	EC:3.4.17.-	Peptidases and inhibitors	ko01002	deepkoala