Detailed information of agem_s0020.g96.t1 in Acropora gemmifera

Genomic Location: sc0000020_pilon:1239228...1257777
NR annotation: XP_029193550.2, intraflagellar transport protein 88 homolog [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q61371Intraflagellar transport protein 88 homolog OS=Mus musculus OX=10090 GN=Ift88 PE=1 SV=2
Q13099Intraflagellar transport protein 88 homolog OS=Homo sapiens OX=9606 GN=IFT88 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13174TPR_6Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44117INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0019894Molecular Functionkinesin bindingInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0042073Biological Processintraciliary transportInterproscan
GO:0097546Cellular Componentciliary baseInterproscan
GO:0097730Cellular Componentnon-motile ciliumInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16474IFT88; intraflagellar transport protein 88-Cilium and associated proteinsko03037deepkoala

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