Gene detail

Detailed information of agem_s0021.g24.t2 in Acropora gemmifera

Genomic Location: sc0000021_pilon:272423...286315
NR annotation: XP_020625205.1, kinesin-like protein KIF18B isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0021.g24.t2

NNNNNNNNNNNNNNNNNGTTATGTTTTTGACTATGATGGAATTGTACAGCAAAATCAACGCTTCCAAAGACGAGAAAAGTTCTGATGTGGCGGTATCCTATCTTGAGGTTTATAATGAGACAATCAGAGATCTTCTTATGCCAGGCCAGCCACTTGCTGTACGCGAGGATCCACAGAGAGGGGTCTGTGTCAGTGGTCTTACACTTCACAAGCCTGTATCAGCAGAAGAGCTGCTTGGGATGCTGGAATTTGGAAATAACAACAGGACGCAGCATCCCACGGATGCAAATGCTCAATCCTCAAGGTCACATGCTGTGTTTCAGTTTGCTGTTGAAGGCGCTCAGCTTGGTCAAGAGACAGTTCTTCCTTTTGAAGGGTGTAGGCCTTGCTACTCAGGACCTGACCGAGGAACACAACAACATCATTGACTTGGTTGAATCTCAGCATAAAGTGACCTGGGCAGATCAGAGTCTGAAAGAAAATGACATTGCTGATGTGTCCTTTATGTTGCAGAGCTTCCTGTTATCAAGTACAGGAACACCACAAACAAAAACACCCATTAGGAAACGCAGGTTCAACACACCAGTTTTTGACCTAACAACGCCATGCCAGGGTGCTTTGTCTGTCTCAGTTGATGCAAAAAGGACATTTGCACCCTCAGCTACAGCAAATAAGTCAGCAGAGGACATCAATCTTGCAAATACATGCATTTCCCTGACTAAAAGGTTTGAGGCCTTTTCTCCAGCAGCAGAGTCAGTCAAAACAATGGGACAAAGTTCTACAGGACAAGGGCCCATTGCTTCATCAATCGTTATCTCTGGTGTTCAACCAAACAGGAAGGATGTACTGGTAACACCTTTTAGGGAACCATTATCTCGCGCAAATTCTACATCTCCTGCAACGCTGCGGACTCCAATAAATTTGAATAAATCATCAAAATTTGCTGCAACAAGTAGCACTCCTCATCTCAGAATTGGTTGCTGGGCTGATAAACCCACTGTGGAGGATACAAAAGGCAAGATGTGCAGTGCAAAACCCTTGAGAGAATCAAACAGCCTTGATATCTCTGGAATGCTGCCACTTCAACAAAGTCCTGAAGACAAGGAGCAGTACGTGAAGCCAGTATCACAGATGAAAAGACCTCCTGTGAATGATCCTCTGTCAACACCTCTCAGAGAACTGCCAGTCAACAAGAAGACAGAGATTAAAGGTCAACTGCCTTCAATTTTGTCCCAATTAACAAATCCTCTTAGTAAAGACAAATCTAAAAATCAGCAGAAGAGTAAAGATATGATGCCAAAAAGGGTTAGCAAAGCTACAAAAGAAAATGAAAATGTGCAGCTGTCAAAGACGCCTTTACGATCATCATCCAGTGTCTTAGAGCTTGACAGACTCCATTCAAAGAAAATTAAGAAGCACATAAATGGTTTGAGAAGAGCAGTGAGCAGTACCAGCATTGGGACAAGCAGAAACTTTGCCCCAAGATCATCTGCCATTTACCAGAACTTACCAAAAACAAAGATTTGAGTAAAATACCCCAGAAAAGTAAGCATTTGAATTTGCAACCTTTCACAGCAAGACCAAGATGGCAATAGAATGATTGATGTCACCCTTAAATTTACTTTTACAATTACAATAATTATTATTTTTAAATGTTGTTTCAATATTGTACATACTTTTAACTTTGGAAAACATGTTATTTCCTGAAGTAACAAAATAATGTTTTGAGGCACCTTTCACACGGAAGAAAAATCTTCTTTCAAAGATCTCTATGGATTTCTTTATAGCTATTCATACAATGTTCCCTAGAACACGTAGATTGTCTTAGAGACTCTTAGCAGATAAAATCTGGATAACAAAGCATCCTTTCGAAAGAGTGTTACAAGTGCAAGCTTTTAGGGTGGAAGAAAACAGTAACATTATTAGTGCTTCCTACATTTTATTTATTTTGTAAATGGAGCAATAATTGTTTTGGGGTAATAAATCAATGTTCTTCAA

Protein

Uniprot

Uniprot term	Description
Q5ZLK6	Kinesin-like protein KIF18B OS=Gallus gallus OX=9031 GN=KIF18B PE=2 SV=1
Q6PFD6	Kinesin-like protein KIF18B OS=Mus musculus OX=10090 GN=Kif18b PE=2 SV=2
Q86Y91	Kinesin-like protein KIF18B OS=Homo sapiens OX=9606 GN=KIF18B PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan