Detailed information of agem_s0023.g141.t1 in Acropora gemmifera

Genomic Location: sc0000023_pilon:1878155...1911656
NR annotation: XP_044183983.1, uncharacterized protein LOC114958589 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02010REJREJ domainFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF00801PKDPKD domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF01822WSCWSC domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR042060DomainPolycystin-1 like, PLAT/LH2 domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR000601DomainPKD domainInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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