Detailed information of agem_s0027.g157.t1 in Acropora gemmifera

Genomic Location: sc0000027_pilon:2140270...2180590
NR annotation: XP_044179537.1, integrin alpha-9-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P13612Integrin alpha-4 OS=Homo sapiens OX=9606 GN=ITGA4 PE=1 SV=3
B8JK39Integrin alpha-9 OS=Mus musculus OX=10090 GN=Itga9 PE=1 SV=1
Q13683Integrin alpha-7 OS=Homo sapiens OX=9606 GN=ITGA7 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan
PF20805Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013519RepeatIntegrin alpha beta-propellorInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR048285DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR018184Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR000413FamilyIntegrin alpha chainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

TOP