Gene detail

Detailed information of agem_s0029.g77.t1 in Acropora gemmifera

Genomic Location: sc0000029_pilon:1116507...1127061
NR annotation: XP_044174973.1, set1/Ash2 histone methyltransferase complex subunit ASH2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0029.g77.t1

GTCTGCAAACCGCAGCGACCTCAAGTCAGGCAACATCAACCAAGCTTTGCTGGAAGCTGCAGTTGCAGATCGCACATAAAGAGCAGTCATCTAGGCAGGCGAGCAGCAGATGGAGATACAACGGGCGAAAAGGCAGAGCAGACACCTGACGGCAAGGTCAGCACTCTCAGATGTCCTCCACGCCTTCATCTGCGCTAACTGCAACAGAAAACAGCGTCCAAGGTTTGGTCTTTGCAGGCTTAGAGAGCACTGCAAACCCACCACAGACTGACCACCCACGGTGCTTTTCCATTGTCTTCTGAGACAGACCGGTGCCAACAACAATATATTTTTCATGCAACAGAAGCACGTGTTCTGGCTGAGTTTGCATGCATGTCACGCAATCCTTTGCATGGGGTAAAAAAGATTTTGTGAGAGAGAAAAAAAGAGCTCGAGAATACAGATTGGGAAATTCAAATGTTTGCATTTCTTTAAATTCTCAGCAAGTGGCAACAAAAGTAAGTCTGTGACAAATGCGGGAGCTCTGGGAAGAAGCTCGCCCCAGCTCCCATGCGCGGAAACAAAGGGACAAACAACATGGCGGACGAAGACATTGACATGGAGAACTTTGATGAAAGAGCGGAGACAGCAAGCGATTTTGCAGCTGACGATGACAATGAAAAGCTGGATGCATACGATACTTTGGAAAGTGAACCAGAGATGAGGGTTGGAAGAAGCCTGACAGACAGTGATTTACTCATTGCATTGGCTCAGGTTTCAGAAAACAAGGACATGATAATACCTGAAAGTAATCACCTTGGAAAACATGGCCTGAATACCCATGGCCTGAATGCCAGTTTGAACAGCAGTCTTGGTTCCTTAGGCGGAAGTCTCAACAGCAGTAACTTGCTTATGAGTAAAGGAAAGGAAAGTACTGGCGGCTCAGTGCCGCGCAAGTCAGCCAGGGGAAAAAGAAAACTGGACAGCAGTCAGCAGTTATCATCTTCCAAGAAATCAAAAGGCGATATACCACCTTCACAGAAACTTCCACCTCATGGATATCCTCTGGAGCATCCCTTCAACAAGGATGGTTATCGATACATTCTGGCAGAGCAAGATCGTAATGCTCCAATGGCAAACATGGATTTGGAATTTTGGGCTGGAAAACCAATCCCTGGAGATTTATACAGGATTAAACTTCACAAAGAAGTTCTTCTTTCAATGAATGACCGAGCCCCTCAACTCAAGTTGTCTGATGACAGATTATCAGTTACAGGAGAGAAAGGTTACTGTATGGTGAGAGGGACCCATGGAGTCACAAAGGGAAAATGGTTCTTTGAGGCAACTGTAGATTTACCGCAAGATTCTGCTACTAGAATAGGCTGGTCACAGCTTTATGGAAATCTTCAAGCCCCTTTAGGTTATGATAAGTTTAGCTACTCATGGAGAAGCAAAAAAGGAACCAGGTTTCACGAAAGCAGAGGAAAACACTTCAGTGATGGGTTCACAAATGGTGATGTAGTGGGATTTTACATAAGTCTCCCAGAAAACGATAGGAAACCAGCAACATTTCTTCCACCAACCTATAAAGATAAGGCGTTAATAAAGTTCAAAAATCATCTTTATTTCGAAGAAAAAGATCTCGTGGACAAGGCAGAAAAGAGTTTAAAACCATTACCTGAAAGCCAGATAAAATTCTACAAAAATGGCGTCTGTCAGGGAGTTGCGTGGCAGGACATTTACGAGGGAACGTATTACCCAGCCGTGTCACTCTACAAAAATGCAACGATCACGCTTAATTTTGGACCCGATTTTCAATTCCCGCCAACGGATGAGGACTTTCAACCGATGAGTTACAAAGCCGTTGAATTTGCCGTGGAGCAAAGCTTATCCGACCTTCTGTTCCTTGTGAATTCACAGGAAAGACCTATCCCCCTCCCTGAGAAAATTCTTGTCCCTCCAAAGCGGAAGTGACGTCCCGAAGAGTCAGTGCTTGCATTTTAACTAAGTGTATCTTATACTTTCACTAATTTGTAATATATCTTGTATGAATTGTAAATATCGCGAAACGAAAAATTCACCATCGATCAGAACTTTTCCTGACATACCTTTCATTTACTTTTTAATTCGCGCGACGTTTAGCAAACCATTTTAATAAACAATTCGCTGATATTTGACAAACCGCTGCCTGAAATTGCTGGTCGTCAAAATAAAAGAGTCTTGTCTTC

Protein

Uniprot

Uniprot term	Description
Q91X20	Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Mus musculus OX=10090 GN=Ash2l PE=1 SV=1
Q9UBL3	Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Homo sapiens OX=9606 GN=ASH2L PE=1 SV=1
Q94545	Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Drosophila melanogaster OX=7227 GN=ash2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00622	SPRY	SPRY domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003877	Domain	SPRY domain	Interproscan
IPR001870	Domain	B30.2/SPRY domain	Interproscan
IPR037353	Family	Histone methyltransferase complex subunit ASH2	Interproscan
IPR043136	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10598	SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0048188	Cellular Component	Set1C/COMPASS complex	Interproscan
GO:0051568	Biological Process	obsolete histone H3-K4 methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14964	ASH2; Set1/Ash2 histone methyltransferase complex subunit ASH2	-	Chromosome and associated proteins	ko03036	deepkoala