Gene detail

Detailed information of agem_s0032.g131.t1 in Acropora gemmifera

Genomic Location: sc0000032_pilon:1392984...1411827
NR annotation: XP_029196811.2, solute carrier organic anion transporter family member 4A1-like [Acropora millepora]
Species Acropora gemmifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

agem_s0032.g131.t1

ATGGAGTCGGAGGCGCAGAAACCAAATGAGAGAGATCTTTTGTGCGGCTGGAGATCATATCGGCCCAAGTTTCTTCAAAAGCTCAACACGCCCAAATGGTTTCTTGTCTTCCTCACTATTTATTCGTTTATGCAAGGAATGATAGCTACGGGATTAACAGCTGCTGGGCTTACTTCACTAGAAAAACGCTTTAAACTCAGTAGCAAGCAAACTGGCATGATCATAGCAGCCAATGACGTATCCGCTCTTCTCCTTATCATTTTCATTAGCTACTTTGGAGGCCACAGGAACAAGGCGCGGTGGCTTGGAATCGGAGCCATGGTAACGAGCCTTGGATGTCTGATGTTCGCTCTACCACATCTCCTTGTCGGCAAATACACTCCTTTAAATTTCCAAAACACTGCCACGGGGGATGTATGTTTATTTAACAACACAGGGACACCAAGCACATCTCAGACATGCACGGAAGCCAAAGGTTACACTGCATGGAAATATATGCTTGTCTTTGTTGGCGCAAAACTTCTTTTGGGAGCCGGGACAACTCCGTTATTTACGCTGGGTCCCGCTTATATTGATGAGAATGTTAACCCCAAGGCAGCGCCCATGTATCTAGGGGTCTGGTTTACTGCCACCTTTTTCGGGCCTGGAATTGGGTACGTAGCAGGAGGGTCTCTTCTAAACGTCTGGGTGGACCTGATTCAGCCCCCCGGAGTTGACATTACACCGGATGATCCCCGCTGGATTGGGGCCTGGTGGCTGGGGTACTTTTTCGGGGGGCTTCTGTTACTATGTACGTCCATAGCACTGCTTGGTTACCCAAAAGAGATGCCAGGTGCTCAGGAAAGGAGAATGGCTGCAATAAAGGAAGGTCTTTTACCCGCTCGCGATGAACACATTCAAGGTCGACTGAGGGACATCTTACCCGCTACTAAAGCTATTCTGACCAACAAAACGTTTATGCTCAACACATGGGCTTTCTGTTGTACAACACTGATCGCGACCGGTCTTGGACCCTTTGTATCCAAGTTTATTCAGTCCCAGTTTGGAAAGTCGTCTTCGACAGCAGGAATACTCTCAGGCATCGTTATTATTCCAGGGACAGCGGGAGGTATCTTCCTGGGAAGTTACCTTGTCAAGCGAGTGGATGTTCGCAAGTCGTGCAAGACAGCTGCCAAATACTGCTTTATATTTCAATTTATCGGGACCTGGGCAGTGTTAACGTTCTTAATCCCCGGATGTAAAACCACAAGGCTCGCGGGTGTCACTGAGCCCTATAACAACAGATCTGACACAGAAATGGACAAGTTCTCGCAATGCAACTCTCGATGTCACTGTGGCAGTAACGAGTATGACCCCGTGTGTGGGGAAGATCAGATATCGTACTTTTCCCCCTGTCACGCAGGATGTACTGTTCGAGTGATGGATGACGGGAAAGGGGTAAAGGGCAACTTACTGGATATTCAAAGATCTTACATTAACTGCCGCTGTATCCCTTCGACTGAGAGGTTCAAGATCCATGGCTTTGCCAAACAAGGCACATGTGATAGAGACTGCAAAAATCTCATTCCGTTTCTCTTTGGAGCTGTTGTATTGCTGATCTTCAATTTTATGAACGCCACACCAAATAAAACTGTTGTGTTAAGATGTGTGCCAGACAATCAGCGTACTTATGCGTTGGGCCTTCAGTGGTTATTCCTCTGTGTGTTTGGGTCTATGCCTGGTCCTGTATTGTTCGGGGCATTTATTGACAAGACCTGTATTCTTTGGGAGGAAACATGTAGTGGGAAAGGAAGCTGTCTCGAGTACAACAATGAACTGTTGAGTTATCTGTTAGTTGCAGCTGGTCTGTTCTTTCAGGTCCTTTCAGCGGCTCTGTATTTCGGTTCGTGGTTTTTTTGCAAATCAAACGACCTTGTCGGGATGAATCCAGAGGCCAGCCCACAACTACAAGCTCCCTGTCTCACCCCTCCGCAGACTCCAGTGCCAGGCCTAGAGATTCGACAGCAACGACAAGCAAACAGTCAACAGTCAAACTCAGAAGAAGATGCTCTTGCGCAGGATCTGCCTGACGGCAGATGCTCTTCCCCAGTTCTTGGCAGTGTGCGTTACACCATTGGAAACGAAAGTGTTGCTTTGTCTTTTAATAACGAGGGTGAAGAAAGGACTGCAGCAAGCTGCAGCTTTCTACCAGCGACACAGTTTGAATCTTCAATCTAG

Transcript

agem_s0032.g131.t1

GTTACTTCTTTGATCAATTATCCTTGATGAAATTCAAAGCCGGAGGCTAGATTTGTCGAATTGGCACCCAAAGTAGTTTTCCAGAAACTATCGAGCAAATTGCCCTTATAATAATATCAATGTTGGGAAATAAGAGCAGATGGCGGCATTGAATGCGGTTATAGCCATTGATCCTAAACCGTTTCAGCCCATCTTTACCGGCTTGTAGTTCTGACCTGTGGTCCTGTATTTTGTGGCCTGACGTCTCCTCACAGCCGCCTTCTTGGATTGTCTGGCGTTTGCTTGGAACGAGTGATATTCAAAAGGGCCATGCGTTGTCCTTGTGTTGTTGTCAGAACAAAAGATACAAGTTAGTTCTAGTTGCTTGAAGATGGAGTCGGAGGCGCAGAAACCAAATGAGAGAGATCTTTTGTGCGGCTGGAGATCATATCGGCCCAAGTTTCTTCAAAAGCTCAACACGCCCAAATGGTTTCTTGTCTTCCTCACTATTTATTCGTTTATGCAAGGAATGATAGCTACGGGATTAACAGCTGCTGGGCTTACTTCACTAGAAAAACGCTTTAAACTCAGTAGCAAGCAAACTGGCATGATCATAGCAGCCAATGACGTATCCGCTCTTCTCCTTATCATTTTCATTAGCTACTTTGGAGGCCACAGGAACAAGGCGCGGTGGCTTGGAATCGGAGCCATGGTAACGAGCCTTGGATGTCTGATGTTCGCTCTACCACATCTCCTTGTCGGCAAATACACTCCTTTAAATTTCCAAAACACTGCCACGGGGGATGTATGTTTATTTAACAACACAGGGACACCAAGCACATCTCAGACATGCACGGAAGCCAAAGGTTACACTGCATGGAAATATATGCTTGTCTTTGTTGGCGCAAAACTTCTTTTGGGAGCCGGGACAACTCCGTTATTTACGCTGGGTCCCGCTTATATTGATGAGAATGTTAACCCCAAGGCAGCGCCCATGTATCTAGGGGTCTGGTTTACTGCCACCTTTTTCGGGCCTGGAATTGGGTACGTAGCAGGAGGGTCTCTTCTAAACGTCTGGGTGGACCTGATTCAGCCCCCCGGAGTTGACATTACACCGGATGATCCCCGCTGGATTGGGGCCTGGTGGCTGGGGTACTTTTTCGGGGGGCTTCTGTTACTATGTACGTCCATAGCACTGCTTGGTTACCCAAAAGAGATGCCAGGTGCTCAGGAAAGGAGAATGGCTGCAATAAAGGAAGGTCTTTTACCCGCTCGCGATGAACACATTCAAGGTCGACTGAGGGACATCTTACCCGCTACTAAAGCTATTCTGACCAACAAAACGTTTATGCTCAACACATGGGCTTTCTGTTGTACAACACTGATCGCGACCGGTCTTGGACCCTTTGTATCCAAGTTTATTCAGTCCCAGTTTGGAAAGTCGTCTTCGACAGCAGGAATACTCTCAGGCATCGTTATTATTCCAGGGACAGCGGGAGGTATCTTCCTGGGAAGTTACCTTGTCAAGCGAGTGGATGTTCGCAAGTCGTGCAAGACAGCTGCCAAATACTGCTTTATATTTCAATTTATCGGGACCTGGGCAGTGTTAACGTTCTTAATCCCCGGATGTAAAACCACAAGGCTCGCGGGTGTCACTGAGCCCTATAACAACAGATCTGACACAGAAATGGACAAGTTCTCGCAATGCAACTCTCGATGTCACTGTGGCAGTAACGAGTATGACCCCGTGTGTGGGGAAGATCAGATATCGTACTTTTCCCCCTGTCACGCAGGATGTACTGTTCGAGTGATGGATGACGGGAAAGGGGTAAAGGGCAACTTACTGGATATTCAAAGATCTTACATTAACTGCCGCTGTATCCCTTCGACTGAGAGGTTCAAGATCCATGGCTTTGCCAAACAAGGCACATGTGATAGAGACTGCAAAAATCTCATTCCGTTTCTCTTTGGAGCTGTTGTATTGCTGATCTTCAATTTTATGAACGCCACACCAAATAAAACTGTTGTGTTAAGATGTGTGCCAGACAATCAGCGTACTTATGCGTTGGGCCTTCAGTGGTTATTCCTCTGTGTGTTTGGGTCTATGCCTGGTCCTGTATTGTTCGGGGCATTTATTGACAAGACCTGTATTCTTTGGGAGGAAACATGTAGTGGGAAAGGAAGCTGTCTCGAGTACAACAATGAACTGTTGAGTTATCTGTTAGTTGCAGCTGGTCTGTTCTTTCAGGTCCTTTCAGCGGCTCTGTATTTCGGTTCGTGGTTTTTTTGCAAATCAAACGACCTTGTCGGGATGAATCCAGAGGCCAGCCCACAACTACAAGCTCCCTGTCTCACCCCTCCGCAGACTCCAGTGCCAGGCCTAGAGATTCGACAGCAACGACAAGCAAACAGTCAACAGTCAAACTCAGAAGAAGATGCTCTTGCGCAGGATCTGCCTGACGGCAGATGCTCTTCCCCAGTTCTTGGCAGTGTGCGTTACACCATTGGAAACGAAAGTGTTGCTTTGTCTTTTAATAACGAGGGTGAAGAAAGGACTGCAGCAAGCTGCAGCTTTCTACCAGCGACACAGTTTGAATCTTCAATCTAGAGGTGACTAAAGACCGAAATTGATGCGCATGTTTGGAAAGTGAACGTAATCGCTTGAGCGAGGAAATGTCTTCATCCAAGGCTTAGTTTTTAGGATTTTTAGGGGTGGTCGAGATAAGAGTGTGATAGATGAATTTAAGAAAAGTCTCGAGATCTTTCTGTCCCCGTTTTTATCCCAAAGGCGAGATTTGGATAAATTTGATTTGGACAGACCGAGAGGTTAAGTTTGCATGGATTCGCCTCAACTCCGTCTGCATGTCCTTAACATGTCCGAACTAAAACCTTGGGTTACATATGCAGCAACTTGAGTTGATAACAGATTTTGCTTCATTGAAGGGGAATCATTAATAATTTCATCGCTAAAAGATAATTGCACGAAAAAATTCGTATTTTCTTAAATTTCTTGTGTTCAGTTTGACTGTAGTACTTGTACGCAAGGGTAAACTTCGGCATTGACCATTCATTTGTTAAGTCCAATTTACGTGTTGAAGGAAAAAATACTCGCAGGTTTTGTTTTTTTTTTATGACTGAGCAGCCTACAACGCATGCGCAACTAGATGCACTCCAACTTATTGTTGTGGTTTCACACAGTGACTGTTTTAACGAGACAGCGCGTTTTACTGTAAATATGTTTTCTTTTTTCGCGACCTCACAAATTATGCGCGGATTTGGTTTGTTTTTCTATTATTTTTGCATTCTATTTTTACTTACTGAACAAACACCCGTTCAACTACCACCAACAGCCAAAGAAACTTTGGATCACAATCGAATGCACGGATTAATCATCGCTGAAACAGTTTTGATTGGACTTGATAAAGTTGGCTTCATGAATGTACCGTTAAAATTTAATTAATGATTCCGAGGTTACTTTTTATTGGGAAGAAAACATTAAGTCACGTTTTCAGATTAACATTTGCTTAAATTTGGGATCTCAAATTTACGGGCTCAATATAATCTTAATGGTATTTGGTGTTATTTTTCTCAGTGCGTTTTATGTGCAATAGAACTGAAATGGAAAATTTTCTACATCCGTATTTTTCGCTTTATTTTTGATATTCTGTGGTGTGTTTAATTAACCTCAGGGGTTTAAATTTAACTTCATTTGTATGTCACTAAAGAGCAAAGGGGAACGATATTTTGATTGTTTTAATTATTTGCTTAATTTTATTGATAGTCTAGCCTAGTTTTAAAATTGACGCAATTCATGATTGCCAAAAATTCTTTTGGCAAAGTGTAGACTATTCTGAGACAAGCGGAAGAAGAAAATTGCTCGCAAGCTTTTTTCCCTCGGTTTGGGTCGTCTCCTCAATTTTTTTCAATTCTTATTGCCTTGAATTGCCTACGTCATTTTTTTTTTACTCGGTGGCAACTAAGTACACAACTTCTGAAGTTTTATTTCAGCCACAACTTTCTGGTGTTAAGGCAATGCTTTCTCGGTGACGTTTTGGCAGTATTGTCGAATAAAAAAGAATTCGGTTTCTCTAAAACCGAACGTTTTCTCACACATTGACAAAGCAACTGTAGATTTTGAAAGAAGTTGTTAATATTGACTGACCATGATGATCACCGGAAGTTACCAGGCTGTGATGACTTCCGCCTAGTTGGTGATCCAAAACAACTTTTACTTAACGAAGTTATTAAATTAGAGAATCCAAAGCTAAATCTTTAAATTTTATATAGTAATTTATCATTTGATCATTATTGTACATAGAGAAAAATAAGGTTAGTATGTGATATTTAAGAAAACGGAAACAAACTTTCTTACACGATACTTTAGTTATCGAACaccgtgcatataaatgtacaGGGTCTCTCTCCTATGACGTATACACAGCACTTATTTGAAGACAAAAAAGATGACTCCGTCACGTGTGAAGAACGTTTGTTTTCTTAAAATTGATATTAATTTTGAATGAGATATTAAAAGTTCTATTTTTAACTTGTTTATCGTTCTGGGTGGTCAGCAGTTTGTAGCAGCTAACGACTGACCAACCTGCCTCGCACCAACTTAACGCGAAAAAACGTTCTTGTTTTGTGTTGGCGCTAACAGAAGGACCCGCACTATTAACAAAGGTTGGAGACAATTCAGTGGCGACCATCTTTATGCTTTGATGAATTTCTCCTCTTCCAATGTGCGTGGCACTCAGGTCTCTGAATCTCGTTCCTTGAGTTACTTTTCTTTCCATTTAGATTGATTATTATACACTTTTAGCGCGAGTTCGTGTGTGAATTCTGTAATGATTCTCCGAGACGTTTTCTGCCTTCTTGCCCGGCCGGTGATGCAAAACAGTGGTCATTTTCAAGGGACATGCGTGCTGGCGTGCTTTGTCCCATTTGATCCGACGCTGGAAATTCTTGAAGACAGTAAACGTCTCAACAGTACATTTCAGAGTTCGCTGAATTGCTTTGTTTGCTTAATATTTCTCTGAGTGTATTGACAAGAATTGTGAATAAAACTTGATTTAAGGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6ZQN7	Solute carrier organic anion transporter family member 4C1 OS=Homo sapiens OX=9606 GN=SLCO4C1 PE=1 SV=1
Q71MB6	Solute carrier organic anion transporter family member 4C1 OS=Rattus norvegicus OX=10116 GN=Slco4c1 PE=1 SV=1
Q8BGD4	Solute carrier organic anion transporter family member 4C1 OS=Mus musculus OX=10090 GN=Slco4c1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000317 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03137 all species →	OATP	Organic Anion Transporter Polypeptide (OATP) family	Family	Interproscan
PF07648 all species →	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR004156 all species →	Family	Organic anion transporter polypeptide	Interproscan
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR036058 all species →	Homologous_superfamily	Kazal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11388 all species →	ORGANIC ANION TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14354	SLCO4A; solute carrier organic anion transporter family, member 4A	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.