Gene detail

Detailed information of agem_s0032.g132.t1 in Acropora gemmifera

Genomic Location: sc0000032_pilon:1416011...1426253
NR annotation: XP_029196376.2, putative cytochrome P450 120 [Acropora millepora]
Species abbreviation AGEMM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

agem_s0032.g132.t1

GGGCGCCTTGCACTGAAGAGCCAAATTTTTGGTCCTCCCTCAAGCGTTAAATAATGCATTGCTTCGTGTTATCCGTTGTCAACCTAATGGAAATGAATTTGTTCTTTTGATCATTTTTTCACCGTTTTTCAAACGTGTGTATATGTTTTTGGAGATCGTGGTTGTACTTGTTGTTTCTTATTTGATGGTGGTGTTGTGATCTTATGGGGTTCTATTCAATAGACATACGAAGTTAGGTTTACGTCGCTGCCTCTCAGTCTATTAAAATGACATCCTTACCTGGACGTATTGGCTGGTCAGTTACTGGCGATAGAACTCTTGACTTTGCAAGAGATCCAATGGATTTCACTCAGAGACACATCAAGGCATTCAAATCCAGGATGTTTCAAGGACGGTCCATGAATCGTCCACATGCTTTTGTTGCTTCCAATCAAGGCTTGAAGGAAGTCTTGGAAGAGAAAGCTGATATGTTTAGCATGGGATACAGGGACTTTGGCTACATGTACAGTTTGTTTGGTGATTTAGTGATATTTAGCAGTGATGACGAAGCCTTGAGACTGAGAGGTATTCTTCACAAGATTTTCAAACCTGAAGAAGTCACAAGATATATGAGCCAAGTGGAGATTGTCTCAACTCGATTATTGAACACCATAAATGACCAAGACATTGTTATTCCTTACAAAATGTTTAAGCTGCTTACGACACAGATATGTTTGAGCTTGTTTTTGGGATTGGAGATGGAGAGTGCAAAGGAAGAAGCAAAAGCCATCATTGAGTTAACGATTACCCACTGGCATGGGCTCATATCTGTTCCAGTGAATTTCAATGTCTATGGTTATAAATCCAAATACACCAAGGCCATGATTGCCAAGGAACGACTTCTCAACATTGTTAGTAAACGTCTTGCAGAAGAGAAAAGTGGGTTTCTCAGTGTTGTGAGAGAAGCCGAGTTTCAATCGAAGGCAGAAATGGCCAATCATGTGTTGCTGTTTGTCTCTGCTTTGATTCCAAAAGCCTTGGCTGCTTTGATGACGTCATTCTGTCTTGAGCTTGCCAAACCTCAAAATGCTGAGAAGAGGCGCAAGGCAGCCCAAGATGACAGGTACCTGGAAAACGTGCTTTTAGAAGTCAAGCGACTTTGGCCTCCGTTTTTAGGGGGAAGAAGGCTTGCAAAGGAGGATGTGGTAATCGACGGTTATAAAATTCCAGCTGGTCATTATATAGCGTTACTAACAAGAGCCGCCAACTGTGATCCTAAAATATTCCCCGAGGCTGAAACGTTTTTGCCTGAACGATGGGACACATGTAACCAATTAGACCGAGAGCGAGTGTGGACATTCGGTGGAGGTCCTCGTATGTGCATAGGAGACAAATTCATTGGCAAAATCATTAAGCTTCTTGCAAAGCATCTTCTTCAATCATACGAGTGGGAGCTGGTGCCAAACCAAGATCTGACGTATAAGTGGTTGCCTGTGGCTCGTCCGAAGAATGACGTGCAGGTGGTCTTCACAAAGATTGGATTATGAAAATAATCTGAGGCTGTAGTTAATCGAGAAAAAAACCGAAACGTTAAGAATGGAAGAAATGTTTTCTTGAGCTTTCTTACCTCTTCCGTCTGATCTGTTTACATTTTGCTATATTAATTGGCGAGACTGTTGAATACAGTGGTTGAAAATTCTCTCGGAAGGGTTGCTGTTGGTTTTTATCACGAGAGTCGTTCATGAAGGCATGCATGGTTATTCATTGCTTATTTTTAGCTTGAAGCTGTGTGGAAGATGAATGTGGAATGCTAACCGTAGCATTAAAAAGGTAGAGGATATGTCCTCTCAGTGATGACTCGTGTAGACTCGGAAAACCTGATATGCCATTACCGAATTACCTTTGACCTCGTTTTCAAAGCGAGTTTTGAGCAGGGCAATACTATGCCAGTAGTAAATACATTTTCCTTTAATATTCACGACATATCATAGTGAAAAAAACATGTGTAAAATAGGGGATTTTCAGTTGATAAGTTGGTATCTTAGTTACaaaaagaaaaaaaaaaacagaaaaaaaaagaaaaaCAGGAGAAGTTTTTTAAagcgaagatatggatgacgtcacctgttgttatcaatgtcccaaccagagcctcattggctggcgaaagaaaaggttcttttgttcgatggctggaaaatttgaatatcaaaagaaatttgactcaatatttgtaaacaaatatCTTCTCTATTAGCATATTTATGAGATTTTTTTCTGTGATCTTTTTGCTTAACCAAAAAAGATGTTTATTTTCACTTAATTGTTGTTATTATATTTTTGTTAGGTCGCGCTCATTCTTCCTCGAACGCGAATGTTGCGCCTCTTTGTTGGATCGTGCGCATTGTATTCAACAATTAGTTTTTGTTTTATCTCGCTTTATACGAACATTTTTCTCATATTTTTTAATCTCTTTTTTTTTCTTTATTTCCTTTATTCACCTGCTATCTAGTCAAAAATTTTCGTCACGAGGAGCTAACAAGAAAACCAGCAGGTTAATATAGCTTCTCAGGTCCAAtattaccattcattgaattattatgattattttattaAAAATCGAATTATGATCGGACGCAATTATTTTTCTTTTGTTTaacaaataaagaactctaagccgtgtattacactataataaaacactacgggcatttgagaacacgagggaaatgcagaaaacacgagccgcgggcaagtgctttctacatttctcaagtgtttacaaatgtcaggagtatgtaaagttaatgtggagaagacaataaaacacgctttttctg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2KIG5	Thromboxane-A synthase OS=Bos taurus OX=9913 GN=TBXAS1 PE=2 SV=1
Q2PG45	Thromboxane-A synthase OS=Macaca fascicularis OX=9541 GN=TBXAS1 PE=2 SV=2
P24557	Thromboxane-A synthase OS=Homo sapiens OX=9606 GN=TBXAS1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006090 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067 all species →	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036396 all species →	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR017972 all species →	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR001128 all species →	Family	Cytochrome P450	Interproscan
IPR002403 all species →	Family	Cytochrome P450, E-class, group IV	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24286 all species →	CYTOCHROME P450 26	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0016125 all species →	Biological Process	sterol metabolic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for agem_s0032.g132.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.