Detailed information of agem_s0037.g70.t1 in Acropora gemmifera

Genomic Location: sc0000037_pilon:898363...908702
NR annotation: PFX23228.1, Histone H2A [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35061Histone H2A OS=Acropora formosa OX=126732 PE=3 SV=2
P19178Histone H2A OS=Platynereis dumerilii OX=6359 PE=3 SV=2
Q6PV61Histone H2A OS=Penaeus vannamei OX=6689 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF00538Linker_histonelinker histone H1 and H5 familyDomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR002119FamilyHistone H2AInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23430HISTONE H2AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan

TOP