Detailed information of agem_s0039.g105.t1 in Acropora gemmifera

Genomic Location: sc0000039_pilon:1537512...1566212
NR annotation: XP_044180318.1, uncharacterized protein LOC114949863 isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UL62Short transient receptor potential channel 5 OS=Homo sapiens OX=9606 GN=TRPC5 PE=1 SV=1
Q9MYV9Short transient receptor potential channel 5 OS=Bos taurus OX=9913 GN=TRPC5 PE=2 SV=2
O62852Short transient receptor potential channel 5 OS=Oryctolagus cuniculus OX=9986 GN=TRPC5 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|OTU|OTU
Ubiquitin FamilyDUB|ULP|ULP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF02338OTUOTU-like cysteine proteaseFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR003323DomainOTU domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR002153FamilyTransient receptor potential channel, canonicalInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10117TRANSIENT RECEPTOR POTENTIAL CHANNELInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015279Molecular Functionstore-operated calcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034703Cellular Componentcation channel complexInterproscan
GO:0051480Biological Processregulation of cytosolic calcium ion concentrationInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0070679Molecular Functioninositol 1,4,5 trisphosphate bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

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