Detailed information of agem_s0045.g97.t1 in Acropora gemmifera

Genomic Location: sc0000045_pilon:1494725...1529979
NR annotation: XP_044162759.1, chromatin-remodeling ATPase INO80-like [Acropora millepora]
Species Acropora gemmifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZPV2Chromatin-remodeling ATPase INO80 OS=Mus musculus OX=10090 GN=Ino80 PE=1 SV=2
Q9ULG1Chromatin-remodeling ATPase INO80 OS=Homo sapiens OX=9606 GN=INO80 PE=1 SV=2
Q9VDY1Chromatin-remodeling ATPase INO80 OS=Drosophila melanogaster OX=7227 GN=Ino80 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003777 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13892
all species →
DBINODNA-binding domainDomainInterproscan
PF00176
all species →
SNF2-rel_domSNF2-related domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050520
all species →
FamilyINO80/SWR1 chromatin remodeling helicaseInterproscan
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR020838
all species →
DomainDBINO domainInterproscan
IPR049730
all species →
DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR000330
all species →
DomainSNF2, N-terminalInterproscan
IPR038718
all species →
Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45685
all species →
HELICASE SRCAP-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006281
all species →
Biological ProcessDNA repairInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0031011
all species →
Cellular ComponentIno80 complexInterproscan
GO:0042393
all species →
Molecular Functionhistone bindingInterproscan
GO:0043044
all species →
Biological Processchromatin remodelingInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0140658
all species →
Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11665INO80, INOC1; chromatin-remodeling ATPase INO80EC:5.6.2.-
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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