Detailed information of agem_s0050.g89.t1 in Acropora gemmifera

Genomic Location: sc0000050_pilon:1410932...1437856
NR annotation: CAH3166176.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UKV8Protein argonaute-2 OS=Homo sapiens OX=9606 GN=AGO2 PE=1 SV=3
Q8CJG0Protein argonaute-2 OS=Mus musculus OX=10090 GN=Ago2 PE=1 SV=3
Q9QZ81Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16487ArgoMidMid domain of argonauteDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02171PiwiPiwi domainFamilyInterproscan
PF02170PAZPAZ domainDomainInterproscan
PF08699ArgoL1Argonaute linker 1 domainDomainInterproscan
PF16488ArgoL2Argonaute linker 2 domain FamilyInterproscan
PF16486ArgoNN-terminal domain of argonauteDomainInterproscan
PF00890FAD_binding_2FAD binding domainFamilyInterproscan
PF02910Succ_DH_flav_CFumarate reductase flavoprotein C-termDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032473DomainProtein argonaute, Mid domainInterproscan
IPR003100DomainPAZ domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR037099Homologous_superfamilyFumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamilyInterproscan
IPR045246DomainArgonaute-like, PIWI domainInterproscan
IPR003165DomainPiwi domainInterproscan
IPR014811DomainArgonaute, linker 1 domainInterproscan
IPR003952Binding_siteFumarate reductase/succinate dehydrogenase, FAD-binding siteInterproscan
IPR011281FamilySuccinate dehydrogenase, flavoprotein subunitInterproscan
IPR032472DomainArgonaute linker 2 domainInterproscan
IPR032474DomainProtein argonaute, N-terminalInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR030664FamilyFAD-dependent oxidoreductase SdhA/FrdA/AprAInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR003953DomainFAD-dependent oxidoreductase 2, FAD binding domainInterproscan
IPR014006FamilySuccinate dehydrogenase/fumarate reductase, flavoprotein subunitInterproscan
IPR036085Homologous_superfamilyPAZ domain superfamilyInterproscan
IPR027477Homologous_superfamilySuccinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR015939DomainFumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11632SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0000104Molecular Functionsuccinate dehydrogenase activityInterproscan
GO:0005749Cellular Componentobsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)Interproscan
GO:0006121Biological Processmitochondrial electron transport, succinate to ubiquinoneInterproscan
GO:0008177Molecular Functionsuccinate dehydrogenase (quinone) activityInterproscan
GO:0009055Molecular Functionelectron transfer activityInterproscan
GO:0022900Biological Processelectron transport chainInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00234SDHA, SDH1; succinate dehydrogenase (ubiquinone) flavoprotein subunitEC:1.3.5.1
Non-alcoholic fatty liver diseaseko04932deepkoala

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