Detailed information of agem_s0055.g38.t1 in Acropora gemmifera

Genomic Location: sc0000055_pilon:880784...884786
NR annotation: XP_029212547.2, coronin-6-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9ULV4Coronin-1C OS=Homo sapiens OX=9606 GN=CORO1C PE=1 SV=1
Q9WUM4Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2
B0R0D7Coronin-1C-A OS=Danio rerio OX=7955 GN=coro1ca PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08953DUF1899Domain of unknown function (DUF1899)RepeatInterproscan
PF16300WD40_4Type of WD40 repeatRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015048DomainDomain of unknown function DUF1899Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015505FamilyCoroninInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10856CORONINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13886CORO1B_1C_6; coronin-1B/1C/6-Cytoskeleton proteinsko04812deepkoala

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