Detailed information of agem_s0055.g39.t1 in Acropora gemmifera

Genomic Location: sc0000055_pilon:884885...921163
NR annotation: XP_044173577.1, LOW QUALITY PROTEIN: helicase domino-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NDJ2Helicase domino OS=Drosophila melanogaster OX=7227 GN=dom PE=1 SV=2
Q6ZRS2Helicase SRCAP OS=Homo sapiens OX=9606 GN=SRCAP PE=1 SV=3
Q9NEL2Helicase ssl-1 OS=Caenorhabditis elegans OX=6239 GN=ssl-1 PE=2 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07529HSAHSA domainFamilyInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014012DomainHelicase/SANT-associated domainInterproscan
IPR050520FamilyINO80/SWR1 chromatin remodeling helicaseInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45685HELICASE SRCAP-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000812Cellular ComponentSwr1 complexInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0043044Biological Processchromatin remodelingInterproscan
GO:0043486Biological Processobsolete histone exchangeInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11661SRCAP, SWR1; helicase SRCAP/SWR1EC:5.6.2.-
Chromosome and associated proteinsko03036deepkoala

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