Gene detail

Detailed information of agem_s0058.g52.t1 in Acropora gemmifera

Genomic Location: sc0000058_pilon:875008...885876
NR annotation: XP_044173147.1, cytochrome P450 3A4-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0058.g52.t1

GACAAAGAGAGTAGGTTAATCTTTCAGAAACCTTTCATATTAGAAAAATATCTGCTTCTTGATCACATTCAAACGGCTGGCTCCGCTTCATAATAAGGGAGCAAGAACAGGAGAAGACTTTTGGATTTCTCAGTGCATTTAAAGTTTAGCAAACAGGGAAAAGCACTAAAGATGGCTGATTTTCTGCAAGCGACAACAACGTTCGTGACCGACCACTGGGTCTCCTTTTCAATTGGACTTCTGCTCCTTCTTATTTACCGATATTGCACAGCGCCATTCACTTTTTTTAAGAAACTTGGAATTCCAGGACCAGAAACTACCCCCTTTTTTGGAAGTACAGCATCTCTGATTTTTAAGCCCAACAAACTTCCAATGCTTCATCTGGATTGGTATAAGAAGTATGGCAAGGTTTTTGGGATTTATTTTTTCCGTGAACCGTTTCTCATGGTAGCTGATCCAGAAATGATCAAGGAGATTCTTGTAAAAGAATTCCCAAAATTTCACGATCGAAAGGCCTTAGCAGATATTCCAAAACCCTACAATCGAATGTTAACTCTGGTACGCGGTCAGAAATGGAAGGACATTCGAAGCATTTTGACACCTACCTTTAGTGCTTCGAAAATAAAACAGATGATTCCCTTCATGAATGAAGCTCTTGATACTTTGCTAGCAAAAGCTGAGAGGATTTCCAAGACAGGGGAAATTGTTGATTTCCACAGGTGGCTTCAGAGCCTAACAATGGAAGTGATTTTGTCAACAGCCTTTGGGGTCAAAGCAGAAACACAAACTGTAGAAAATGATCCCATCACTGAAAGCGCTAAAAAGGCAATGGCTCCTAACCCAGTGGCGGGCCTCCTATTGTTGCTTCCATTTGCAAACCGCCTACTCAAGTACTTTCCAGATATGTTTAACTTTGAGAAGATTGGAAAAGTAGCATCTAACATCATTACTGAAAGGACCAAACTAAATGGTCACAGCAAAAATCATCGAAAAGACATGCTTCAGCTAATGCTTGACGCAAAAGAAGAAACAGGAAGCGAAAAAATTGACAATGAAGATATTCAAGCACAAACTCTCGTCTTCCTTCTTGCCGGATATGAAACCTCTAGCACCACTCTGGGGTTTGTCTCTTATCATCTCGCTCTTGATACGCAAGTGCAAGACAAACTAAGAGACGAGATCGACCGCTTGTGGCCTGGCGATGAGGAAACGCCGTCTTACGATGTTCTTCATAAAATGGATTATCTAGACATGGTTATAAACGAAGCCCTTAGAATGTATCCTCCAGGGTTTGTACTTCAGAGAGATTGCAATGAGGGCTGCACCGTCAAAGGAGTAAATATACCAAAAGGAATGCCCATCATGATCCCTGTCTATGCGATCCATCATGACCCTAAGATTTGGCCGGAACCAGAAAAGTTTAATCCAGAGAGGTTTACAGAAGCCGAAAAAGCAAATCGCCATCCTTACACCTTCATGCCATTTGGTTACGGTCCACGTAACTGCGTTGGAATGAGATTCGCTTTGTTGGAACTTAAGTTAACGCTTGTGAAGCTGCTGAAAAAGTATAAACTCGAACGCACCGAGAAAACTGCGGTTCCAATGGAGTTTTCGGTTGGTGCCACTCTTAATTGTCCTCCTGGAAAAGTTATGCTAAGGATTTCGTCGCGGGACTGAACTAAAAGCTGTGCGCGTAGCTTTCATAGAGTAAAATACCTCTTTCTTAACGTTGCCGTTACGATAACATGGCGGTAAACTCTTTCATCGCAAGGTGTAAATTCGTGAATCCTGTTTTTTACTCTTTTTCTGCAAAAAAGATGCAACGCAACCTAAATATTGTTTCCTATatttttcaggtccgaaaagcgagcatttgaactacaatatgctcgttttgaaaagctgattttttggcatgttttaatgtaagaaaagccagtaggattgcaaagtttgatggctgaaaaccccggcgttgcgaagatataaagggaattgtggcgccagaaataggccccaaaagtctcacgacttttgagaaacaggcccctgATCTGTAAGAGGTTCATGAATATTTTTTTATTCTAGTTTTTGAGAGATAAATCAATTTTGCTCGATGTTAATCGCATGCCGGAATATTTTCCGGTCtt

Protein

Uniprot

Uniprot term	Description
P08684	Cytochrome P450 3A4 OS=Homo sapiens OX=9606 GN=CYP3A4 PE=1 SV=4
P24462	Cytochrome P450 3A7 OS=Homo sapiens OX=9606 GN=CYP3A7 PE=1 SV=3
P79401	Cytochrome P450 3A29 OS=Sus scrofa OX=9823 GN=CYP3A29 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR001128	Family	Cytochrome P450	Interproscan
IPR017972	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR050705	Family	Cytochrome P450 3A	Interproscan
IPR002401	Family	Cytochrome P450, E-class, group I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24302	CYTOCHROME P450 FAMILY 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0008395	Molecular Function	steroid hydroxylase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07424	CYP3A; cytochrome P450 family 3 subfamily A	EC:1.14.14.1	Cytochrome P450	ko00199	deepkoala