Detailed information of agem_s0059.g57.t1 in Acropora gemmifera

Genomic Location: sc0000059_pilon:896527...922773
NR annotation: XP_044179794.1, nucleotide-binding oligomerization domain-containing protein 2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K2X2RNA-binding protein 48 OS=Mus musculus OX=10090 GN=Rbm48 PE=2 SV=2
Q561R3RNA-binding protein 48 OS=Rattus norvegicus OX=10116 GN=Rbm48 PE=2 SV=1
A6QPE1RNA-binding protein 48 OS=Bos taurus OX=9913 GN=RBM48 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR034264DomainRBM48, RNA recognition motifInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR051261FamilyNOD-like receptor (NLR)Interproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR038359Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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