Genomic Location: sc0000066_pilon:1071902...1125476
NR annotation: XP_029180033.2, periodic tryptophan protein 2 homolog [Acropora millepora]
| CDS | |||||
| agem_s0066.g80.t2 | |||||
| Transcript |
| agem_s0066.g80.t2 |
| Protein |
| agem_s0066.g80.t2 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q15269 | Periodic tryptophan protein 2 homolog OS=Homo sapiens OX=9606 GN=PWP2 PE=1 SV=2 | ||||
| Q8BU03 | Periodic tryptophan protein 2 homolog OS=Mus musculus OX=10090 GN=Pwp2 PE=1 SV=1 | ||||
| Q5RFQ3 | Periodic tryptophan protein 2 homolog OS=Pongo abelii OX=9601 GN=PWP2 PE=2 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04003 | Utp12 | Dip2/Utp12 Family | Family | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF03564 | DUF1759 | Protein of unknown function (DUF1759) | Family | Interproscan |
| PF12894 | ANAPC4_WD40 | Anaphase-promoting complex subunit 4 WD40 domain | Repeat | Interproscan |
| PF05585 | DUF1758 | Putative peptidase (DUF1758) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007148 | Domain | Small-subunit processome, Utp12 | Interproscan |
| IPR011047 | Homologous_superfamily | Quinoprotein alcohol dehydrogenase-like superfamily | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR005312 | Family | Protein of unknown function DUF1759 | Interproscan |
| IPR024977 | Domain | Anaphase-promoting complex subunit 4-like, WD40 domain | Interproscan |
| IPR008737 | Domain | Peptidase aspartic, putative | Interproscan |
| IPR027145 | Family | Periodic tryptophan protein 2 | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19858 | WD40 REPEAT PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0000028 | Biological Process | ribosomal small subunit assembly | Interproscan |
| GO:0000462 | Biological Process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0032040 | Cellular Component | small-subunit processome | Interproscan |
| GO:0034388 | Cellular Component | Pwp2p-containing subcomplex of 90S preribosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14558 | PWP2, UTP1; periodic tryptophan protein 2 | - | Ribosome biogenesis | ko03009 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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