Detailed information of agem_s0067.g65.t1 in Acropora gemmifera

Genomic Location: sc0000067_pilon:884031...896832
NR annotation: XP_015748122.1, PREDICTED: uncharacterized protein LOC107327916 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q32PD0rRNA-processing protein FCF1 homolog OS=Bos taurus OX=9913 GN=FCF1 PE=2 SV=1
Q9Y324rRNA-processing protein FCF1 homolog OS=Homo sapiens OX=9606 GN=FCF1 PE=1 SV=1
Q5RFQ0rRNA-processing protein FCF1 homolog OS=Pongo abelii OX=9601 GN=FCF1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04900Fcf1Fcf1FamilyInterproscan
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002716DomainPIN domainInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR006984FamilyrRNA-processing protein Fcf1/Utp23Interproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan
IPR037503DomainrRNA-processing protein Fcf1, PIN domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23080THAP DOMAIN PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

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