Detailed information of agem_s0075.g23.t3 in Acropora gemmifera

Genomic Location: sc0000075_pilon:511860...535045
NR annotation: XP_015767228.1, PREDICTED: cartilage oligomeric matrix protein-like isoform X2 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q06441Thrombospondin-4 OS=Xenopus laevis OX=8355 GN=thbs4 PE=2 SV=1
P49746Thrombospondin-3 OS=Homo sapiens OX=9606 GN=THBS3 PE=1 SV=1
Q9Z1T2Thrombospondin-4 OS=Mus musculus OX=10090 GN=Thbs4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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