Genomic Location: sc0000081_pilon:573169...590220
NR annotation: XP_029179500.2, transport and Golgi organization protein 6 homolog isoform X1 [Acropora millepora]
| CDS | ||||
| agem_s0081.g52.t1 | ||||
| Transcript |
| agem_s0081.g52.t1 |
| Protein |
| agem_s0081.g52.t1 |
| Uniprot term | Description |
|---|---|
| Q8C3S2 | Transport and Golgi organization protein 6 homolog OS=Mus musculus OX=10090 GN=Tango6 PE=1 SV=1 |
| Q9C0B7 | Transport and Golgi organization protein 6 homolog OS=Homo sapiens OX=9606 GN=TANGO6 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10304 | RTP1_C2 | Required for nuclear transport of RNA pol II C-terminus 2 | Repeat | Interproscan |
| PF13637 | Ank_4 | Ankyrin repeats (many copies) | Repeat | Interproscan |
| PF02985 | HEAT | HEAT repeat | Repeat | Interproscan |
| PF10363 | RTP1_C1 | Required for nuclear transport of RNA pol II C-terminus 1 | Repeat | Interproscan |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF03281 | Mab-21 | Mab-21 protein nucleotidyltransferase domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002110 | Repeat | Ankyrin repeat | Interproscan |
| IPR019414 | Domain | RNA polymerase II assembly factor Rtp1, C-terminal domain 2 | Interproscan |
| IPR036770 | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR000357 | Repeat | HEAT repeat | Interproscan |
| IPR019451 | Domain | RNA polymerase II assembly factor Rtp1, C-terminal | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR021133 | Repeat | HEAT, type 2 | Interproscan |
| IPR039600 | Family | TANGO6/Rtp1 | Interproscan |
| IPR046903 | Domain | Mab-21-like, nucleotidyltransferase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR20959 | TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0009306 | Biological Process | protein secretion | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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