Gene detail

Detailed information of agem_s0086.g9.t2 in Acropora gemmifera

Genomic Location: sc0000086_pilon:391406...400366
NR annotation: XP_044172149.1, hemicentin-1-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P14781	Contactin-1 OS=Gallus gallus OX=9031 GN=CNTN1 PE=1 SV=1
O97394	Protein sidekick OS=Drosophila melanogaster OX=7227 GN=sdk PE=1 SV=2
Q96JA1	Leucine-rich repeats and immunoglobulin-like domains protein 1 OS=Homo sapiens OX=9606 GN=LRIG1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR050958	Family	Cell Adhesion and Cytoskeletal Organization	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45080	CONTACTIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06777	PTPRD; receptor-type tyrosine-protein phosphatase delta	EC:3.1.3.48	Protein phosphatases and associated proteins	ko01009	deepkoala