Gene detail

Detailed information of agem_s0091.g52.t1 in Acropora gemmifera

Genomic Location: sc0000091_pilon:489675...493862
NR annotation: XP_044164214.1, thioredoxin-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0091.g52.t1

GTGGTGTCGTCTATAGAGGGAAAGTCGAAGTGTGTTTTACTGTTTATTGGGAACTTATTCATCTTTGAAATGGCAAAACCTGGGGCAGGAGAAATAGTTGAGCTTGAAACTAAGGAAGACTTTGACAATTTCATGAAGGAAGCTGGCGAAAAACTAGTTGTGGTGGACTTCTTTGCAACTTGGTGTGGTCCTTGCAAGAAGATGTCACCGACTATAAAAAAACTTGCTGAAGAGTATGCAGACAAGGTTTTCTTTGCAAAAGTTGATGTGGATGAAAATTCAGAAACAGCAGAGGATGAAGAGATATCTGCTATGCCAACTTTCAAGCTGTACAAAAGTGGTTCTCAGaccactttcaatatatcaaaattcagcatggtagcaaggcctagatgacacaaacaaagaaaactgaatgaatatgtttattcatttcttttgtttgtgtcctctaagcctcactttcaagctgaattttaatatatcgaaagtggtctgttGAATTTTATTTCTCAATTCTACTGTTGTCATGCATTTTATACATGAGCCCTTGGCTCAGATACCGAGCATAACCTTGATCCCATGCAGTGACTTAAATAAATTGATCAAAATTGCACTTTGATCAGTTGGCTTATTTTGTAACTTGACCAATCAGTGGAACTATTGTTGATCACATTTATACAAACCACTCCCACCGTATTGTGAATGTTGGTTTTCATGACATTGGATTGGCTGATTGTTTGCCAATATTTGTGGTCAGAAAATATAGTTCAAAACAAGCAATTGTGAAGAAAAGACTTACGTACCGTAACATGAAACACTTTAATGCACTTGACTTTTTATCAACTCTTAATGACGTCCCCTGGGATCCCTTTTTGTTTTTTTTATGATATCAATAATGTTGTTGATGCTTGAGAATCTCTGTAGAGTGAGGTTATTGATAAGTATGCTCTGTTATGAGGATCAGAATTACTTTTAGCTTGTTTATGATGTAATTCCAGACTGTTCTAGAATTTTCTTTCAATCTGTAATATTCCAGAAATTTCATTGATGTGACTCAGCAGTTCCTCAAAATATAATAGAGTAATAGAGCGTAatagagtgtgttcacatgatgtcacggtggccatgttggaggagtaagcaaagaaatggcagctttgatggaggagtggaatattcttttggggattaaactctatttttatgcaaattcctccttttgtttcattatggaaatatggcttctggtcacatgagcgaacacactctatTTCAACAGGAAAATTGAGGATGGCAAATTGTTTCATGTAACAGTTGCTCAACTATGGAGTAGCTTATCGTTTGATTTAAGAAGGCAGAAATCTGCCAATCTGTTTAGACAACAATTTGAAAACCTATTATCAGATGAACAAAATTTTTGCCCTTGATTCAatattatatttatatcgttatgttatttatatttttatCCTCAAGTGTATTATGTAATACCCTCATTAAATAAAGCTCTTACTTAATACTTTCTTATATAATACTTTCCTTAATattgattgattgattgattgattgatAACACCCATACTGTCCGTGAAAGATATTGTACAGAATAATAATTACTATTAGCCAACATTATGTAATGCATAGTAAGATATTATAAAGACTCAAACACACTGTGAGTAGGATGTGGATGTATTCATGAACAAAACGGACTGCCATGTTATCCATTTATTTTTAAATACCCATGAAATTGTATCAATGATTCAGCACTAAGGACAATTCCATGGCAGGTGAATGAAATCCCTTTCTTCGGCCAGTTGCTGTTGATAATATTATTATTAATAATTACTCAACAAAGCAGTGATATAACTCTTCCTCCAAATGTCTATGGGCATATTCTCCTGACTGATTTCCTTCCATTATTTTTTGAATTATCTTTGTTGGGAGAATTTCTGTTGATCTTTTCTGGTTGTTTTGTATTAGTGTTATGAAGGGTTAAAATAATGTTTTTTAACCAGT

Protein

Uniprot

Uniprot term	Description
O96952	Thioredoxin OS=Geodia cydonium OX=6047 GN=THIO PE=3 SV=1
P22803	Thioredoxin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRX2 PE=1 SV=3
P22217	Thioredoxin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRX1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00085	Thioredoxin	Thioredoxin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036249	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR017937	Conserved_site	Thioredoxin, conserved site	Interproscan
IPR013766	Domain	Thioredoxin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46115	THIOREDOXIN-LIKE PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0015035	Molecular Function	protein-disulfide reductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03671	TXN, trxA; thioredoxin	-	Chaperones and folding catalysts	ko03110	deepkoala