Detailed information of agem_s0091.g53.t1 in Acropora gemmifera

Genomic Location: sc0000091_pilon:493874...513894
NR annotation: XP_015779318.1, PREDICTED: RNA 3'-terminal phosphate cyclase-like protein [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9JJT0RNA 3'-terminal phosphate cyclase-like protein OS=Mus musculus OX=10090 GN=Rcl1 PE=2 SV=1
Q9Y2P8RNA 3'-terminal phosphate cyclase-like protein OS=Homo sapiens OX=9606 GN=RCL1 PE=1 SV=3
Q2KHX8RNA 3'-terminal phosphate cyclase-like protein OS=Bos taurus OX=9913 GN=RCL1 PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05189RTC_insertRNA 3'-terminal phosphate cyclase (RTC), insert domainDomainInterproscan
PF01137RTCRNA 3'-terminal phosphate cyclaseDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR013791DomainRNA 3'-terminal phosphate cyclase, insert domainInterproscan
IPR036553Homologous_superfamilyRNA 3'-terminal phosphate cyclase, insert domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR020719Conserved_siteRNA 3'-terminal phosphate cyclase-like, conserved siteInterproscan
IPR037136Homologous_superfamilyRNA 3'-terminal phosphate cyclase domain superfamilyInterproscan
IPR023797DomainRNA 3'-terminal phosphate cyclase domainInterproscan
IPR016443FamilyRNA 3'-terminal phosphate cyclase type 2Interproscan
IPR000228FamilyRNA 3'-terminal phosphate cyclaseInterproscan
IPR013792Homologous_superfamilyRNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/betaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11096RNA 3' TERMINAL PHOSPHATE CYCLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0000479Biological Processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

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