Gene detail

Detailed information of agem_s0095.g11.t2 in Acropora gemmifera

Genomic Location: sc0000095_pilon:161260...190765
NR annotation: XP_029185153.2, cytosolic carboxypeptidase 2-like isoform X1 [Acropora millepora]
Species Acropora gemmifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

agem_s0095.g11.t2

ATGAAAGATAAAGTTTTTCATGAAAGCTCTCAAAGTGATGATAATAACGAGGTACTAAACCGAAGGTCAAGATCAGGAGTTGCTCTACTTCATAAACCAGCAGGTCTGAGATTTTCTGACAAAGAGGCTCGCACGACACAGCTGGTTTTCAGCTATCAAGGAGGGAAGAAGGTTCAAAAGCTCAGAGAACCAAGAAATTTGTATTCATTTTGTATAGAAAAAGGCCAACAGTCTTCGCCAAGATGGCCAGTGCAATTAAAGGTCTTACCAGTGCGTCCTAAACACATCCATTATGTTCCAAGAAATCCAGAACCATTTTTCAAGCCAACCAAGACTTTAAATGACAGTTGTCTCCCTAAGCTTGCTTATGATGAGGGAACAGTTGTGTATGACAATGAACCAGGCCCTGATAAATATTTTCTCAGATCTTGTGTTGGTGGTGCCCAAGTTTCAAGCGAGCCTTTCTACCATTTGACGTCTCCTGATGATTGCACTTTGCTGTTTGAGTCCCGCTTTGAATGTGGGAATCTCCTCAGAGCTGTGAAAGTTTACAACAATGAATACCAGCTGTGGCTAAGAAATGACCTGTATACAAATAAACACACCCAGTGGTATTACTTCAGAGTTCAAAACACAAGACCCTCCATCAGATACAAGTTTACCATCATGAATCTACTCAAATCTGGAAGCTTATACAATGAGGGCATGCGACCTTTGTTTTACTCCGAAATGGATGCTGCAAAGAAAAAGATTGGCTGGGTTAGGAAAGGAGATGATATCAAGTACTACAGAAATGCTATCAAGCGTGAAGATACAACGAAAGACAAGTATCATTACTCGCTGACCTGGACTTGCGAATTTCCCAATGAGAAAGACACGTATTATTTTGCTCACTGTTATCCATACACTTATTCAGACTTGCAGGAATATCTTCTGGACATAAGAAGCGACCCAGTTCAATCAAGGATCTGCAAGCAGAGAGTATTATGCCAAACACTTGCCGGGAATCTCGTTTATGTGCTCACAGTCACAAACCCATCTAGAAGACCAACAGATGCAGAGGCAAAGCAGAATGTGGTTGTGACGGCGAGGGTTCACCCCGGAGAGACAAACTCCAGCTGGATGATGAAAGGACTTTTGGATTATCTAACGAGCAATGCTCCTGACGCAAAACTTCTTCGTGACACGTTCATATTCAAGATTGTTCCAATGTTGAATCCTGATGGGGTGATTATAGGGAACTATCGCTGTTCTTTGGCCGGGAGAGACCTAAACAGGAACTACAAAACAGTGCTTAAAGATTCTTTTCCTCCCATTTGGCACGTGACCAACATGGCTCGGAAATTGTTGGAGGAGAGAGACATTACGCTGTATTGTGATCTACACGGACATAGTCGCAAGCAGAATGTCTTTATTTACGGCTGCGAAAATAGGTTTGATCCGCTGAAAAGGCTCCGCGAGAGAGTGTTTCCCGTGATGATATCTAAAAATGCTCCAACTCAGTTTTCATATGAAGGATGCAAGTTCAAAATTCAGAAGAGCAAGGAGGGAACTGGAAGAATTGTGATGTGGAACTTGGGAATTATGAACAGTTTTACTCTGGAGGCAACCTTTTGTGGGTCCTCCCTTGGAAAACGTGCTGGGAATCATTTTAACACTGCAGATTTTGAATCTATGGGATATCATTTGTGCGACACCCTCTTGGATTACTGTGATCCTGACAACCTTAAGTACGTTTCTATCTTGAGAGAGCTGGAATTGACTATGAAAGCAGAAATTTTAGCGGGCATGAGGCGAAAAGGAACTGCAGCAGCTAATCTGTCAGAAACCGACATAGATTTGGATACAAACTACCCATCCGATATCGAGTCGAGCACTGGTGGTTCGGATAGCTCTGTGTCAGATGGTCTTCCGATGCATATTATTTACGCTGCCGAAGGGTTAAAGATATACGTTTCTATCTTGAGAGAGCTGGAGTTGACTATGAAAGCAGAAATTTTAGCGGGTATGAGGCGAAAAGGAACTGCAGCGCCTAATCTTTCAGAATCCGACATAGATTTGGATGCAAACTACCCATCCGATATCGAGTCGAGCACTGGTGGTTCGGATAGCTCTGTGTCAGATGGTCTTCCGATGCATATTATTTACGCTGCCGAAGGGTTAAAGATAGGACCCAGAAAGAAGAAGAAACTGAAAACAAGGAAAGAACGCAACAAACGTCGTGCAAAGGCCATGAAAATTAAAGATGTGATTTTAGCTGATGTGGCGAGAAAAGCAGAGCAGGATCCACCCGCAGAAGTCAAATTGGTGTACCAAAAACAAACCAAGCGGTCTGCTCAGCCCAGTTCTGCACGGATGAAATTAGGGGCACAGTGTCGGAAAAACGACGAGAGCAGATCATGGACGCCTGTCTCACCACAAGAAGGATTAAGAGTGGAAGGTGCACGATGCCGGCACGAATACTTGGAAGCTGTAACCAATGCCTACATGACAAGTGGAATCTTGGTAACGGAATCGAAAGAGGTTCCGTATTTTCGCTATACGGATGGCAGTATGTATCTGAAGGGGACGCCATCAGCCGAAACAGCTGCGAACGTTGGTCAATGGTCCTCAGCAAGTCCTGTCGATCAAGCACACGGTTTCGATTTGAGTGATGCCGAGGGAAACTTTACTGTGTCTTACTTGGCGAAGAACCAGGAAGGAACGACTGATTGTTCTTCTGTGTTACCGCGAAGTCGAAGCGTTCAGAGGACCAGTTCAGCTCTAGCATTAGCCAGAAAAATCACCATGGCAAACAATCGCCGCAAGAAAGCCGAAGCTGTTGCGCTGGAGGCTGGACTCCAATCTCCATCCTCGTTCATACCCAGGTCTCCAGTTCAACAGTATCCCTACTTTTCGTGGCGGCAGAAGGGGGATTGTCTGTCCAGTACAAAGGCACGTTTGTATGAATCCAAACCACTCAAGGAGCAAGGAATTAGAAAGTCGCTATCACAGATATCGCTGGACGAAAGAAAAGCAAAGAAAGCAAGTCGTAAGAATTTTACGTGGAAACGAGATGTATCAGGTACCACAGCGGAAGGAAAGAGTTTGAAAACTACGCATGACAGCAAAGTGAACAAAGTAGAAGCGAATGAACTCGAATCCAAAAGAGGATCTCAAGTTGTTAAAAATAGTCAGGCTACCGCCACGAGTCAGTCACGTGGAGAAGCAAAACCGACTAAGCACCAGTCATTGGTGGGTCCCAGGTCCATGACGAAATACACAGACAACGGAGAGAAGCCATTCGATAGCATTCCCTTTGACTTGGATCCGAGTACAACCTCTTACAGACTAAATCATACACCTCTTCAAAAATCTAATTCCACTTTGAACGCGTACGACACACCAAGCGTTGTAAGCCACGGTAACACGTCCCTGATTAACGGTCGTCAGTCCCCAGTCTATCTTGCCGTCCCTGTAGACCGGCCTCCAATGAAAGTGAAGCTCAAAAGCCGCGCGTTTGAGCAGGACATGTCAGACATTGCCACAATCAACAAGCTCAGAAGCAAACTGACAAATGCCGACCACTTGGGAACATTGATAACTCATCCTGCAGAGAAGGGACTTGAAGAGGATGGACCCATTTCTGGTGATTGTAAGAGACCTATAACTCATCATAACGAAGGTTCCAAAGCCCCCAAGAATCATGAGCCAGGAATGGCTCAAATTGCTAAGGGACGTGGAGAGGATAGTGCTATTTCGGACGACTCTCGTGAGCCCACAACTCGTCTTAAGGCAGCGGGCAATCTCCCTAAGAATCAAGAACTTGGGACTGCGGCATCAAAGATCTCCCTGACATTTCAGTCTAATTGTTCTGTGCCACCTCAAGAACAAAACCTTTCACCGCCACAAAAGTCCGCTGTGTTCCCTCCTCAGTTAAAGAATTTCTTTAGATCCTACGGTCCATCAAATAGATGA

Transcript

agem_s0095.g11.t2

GTAAACCGAAATTTCCCTCTGTGTTGAAGGAAGGGAGGAAGAGCATAATCTCTAGCCTCTTGAATATCTCGTTTTCTGGGACAAGGGTAAATTTGTTTAGTCTTTGGTGTCGTACAATGTGGATAAGTTCGTCATCGCCGAACTAGCAGCAGCCATTCGCTGTGATTAGAATTTATCAAAAATACTACAGGAACCGATGAAAGATAAAGTTTTTCATGAAAGCTCTCAAAGTGATGATAATAACGAGGTACTAAACCGAAGGTCAAGATCAGGAGTTGCTCTACTTCATAAACCAGCAGGTCTGAGATTTTCTGACAAAGAGGCTCGCACGACACAGCTGGTTTTCAGCTATCAAGGAGGGAAGAAGGTTCAAAAGCTCAGAGAACCAAGAAATTTGTATTCATTTTGTATAGAAAAAGGCCAACAGTCTTCGCCAAGATGGCCAGTGCAATTAAAGGTCTTACCAGTGCGTCCTAAACACATCCATTATGTTCCAAGAAATCCAGAACCATTTTTCAAGCCAACCAAGACTTTAAATGACAGTTGTCTCCCTAAGCTTGCTTATGATGAGGGAACAGTTGTGTATGACAATGAACCAGGCCCTGATAAATATTTTCTCAGATCTTGTGTTGGTGGTGCCCAAGTTTCAAGCGAGCCTTTCTACCATTTGACGTCTCCTGATGATTGCACTTTGCTGTTTGAGTCCCGCTTTGAATGTGGGAATCTCCTCAGAGCTGTGAAAGTTTACAACAATGAATACCAGCTGTGGCTAAGAAATGACCTGTATACAAATAAACACACCCAGTGGTATTACTTCAGAGTTCAAAACACAAGACCCTCCATCAGATACAAGTTTACCATCATGAATCTACTCAAATCTGGAAGCTTATACAATGAGGGCATGCGACCTTTGTTTTACTCCGAAATGGATGCTGCAAAGAAAAAGATTGGCTGGGTTAGGAAAGGAGATGATATCAAGTACTACAGAAATGCTATCAAGCGTGAAGATACAACGAAAGACAAGTATCATTACTCGCTGACCTGGACTTGCGAATTTCCCAATGAGAAAGACACGTATTATTTTGCTCACTGTTATCCATACACTTATTCAGACTTGCAGGAATATCTTCTGGACATAAGAAGCGACCCAGTTCAATCAAGGATCTGCAAGCAGAGAGTATTATGCCAAACACTTGCCGGGAATCTCGTTTATGTGCTCACAGTCACAAACCCATCTAGAAGACCAACAGATGCAGAGGCAAAGCAGAATGTGGTTGTGACGGCGAGGGTTCACCCCGGAGAGACAAACTCCAGCTGGATGATGAAAGGACTTTTGGATTATCTAACGAGCAATGCTCCTGACGCAAAACTTCTTCGTGACACGTTCATATTCAAGATTGTTCCAATGTTGAATCCTGATGGGGTGATTATAGGGAACTATCGCTGTTCTTTGGCCGGGAGAGACCTAAACAGGAACTACAAAACAGTGCTTAAAGATTCTTTTCCTCCCATTTGGCACGTGACCAACATGGCTCGGAAATTGTTGGAGGAGAGAGACATTACGCTGTATTGTGATCTACACGGACATAGTCGCAAGCAGAATGTCTTTATTTACGGCTGCGAAAATAGGTTTGATCCGCTGAAAAGGCTCCGCGAGAGAGTGTTTCCCGTGATGATATCTAAAAATGCTCCAACTCAGTTTTCATATGAAGGATGCAAGTTCAAAATTCAGAAGAGCAAGGAGGGAACTGGAAGAATTGTGATGTGGAACTTGGGAATTATGAACAGTTTTACTCTGGAGGCAACCTTTTGTGGGTCCTCCCTTGGAAAACGTGCTGGGAATCATTTTAACACTGCAGATTTTGAATCTATGGGATATCATTTGTGCGACACCCTCTTGGATTACTGTGATCCTGACAACCTTAAGTACGTTTCTATCTTGAGAGAGCTGGAATTGACTATGAAAGCAGAAATTTTAGCGGGCATGAGGCGAAAAGGAACTGCAGCAGCTAATCTGTCAGAAACCGACATAGATTTGGATACAAACTACCCATCCGATATCGAGTCGAGCACTGGTGGTTCGGATAGCTCTGTGTCAGATGGTCTTCCGATGCATATTATTTACGCTGCCGAAGGGTTAAAGATATACGTTTCTATCTTGAGAGAGCTGGAGTTGACTATGAAAGCAGAAATTTTAGCGGGTATGAGGCGAAAAGGAACTGCAGCGCCTAATCTTTCAGAATCCGACATAGATTTGGATGCAAACTACCCATCCGATATCGAGTCGAGCACTGGTGGTTCGGATAGCTCTGTGTCAGATGGTCTTCCGATGCATATTATTTACGCTGCCGAAGGGTTAAAGATAGGACCCAGAAAGAAGAAGAAACTGAAAACAAGGAAAGAACGCAACAAACGTCGTGCAAAGGCCATGAAAATTAAAGATGTGATTTTAGCTGATGTGGCGAGAAAAGCAGAGCAGGATCCACCCGCAGAAGTCAAATTGGTGTACCAAAAACAAACCAAGCGGTCTGCTCAGCCCAGTTCTGCACGGATGAAATTAGGGGCACAGTGTCGGAAAAACGACGAGAGCAGATCATGGACGCCTGTCTCACCACAAGAAGGATTAAGAGTGGAAGGTGCACGATGCCGGCACGAATACTTGGAAGCTGTAACCAATGCCTACATGACAAGTGGAATCTTGGTAACGGAATCGAAAGAGGTTCCGTATTTTCGCTATACGGATGGCAGTATGTATCTGAAGGGGACGCCATCAGCCGAAACAGCTGCGAACGTTGGTCAATGGTCCTCAGCAAGTCCTGTCGATCAAGCACACGGTTTCGATTTGAGTGATGCCGAGGGAAACTTTACTGTGTCTTACTTGGCGAAGAACCAGGAAGGAACGACTGATTGTTCTTCTGTGTTACCGCGAAGTCGAAGCGTTCAGAGGACCAGTTCAGCTCTAGCATTAGCCAGAAAAATCACCATGGCAAACAATCGCCGCAAGAAAGCCGAAGCTGTTGCGCTGGAGGCTGGACTCCAATCTCCATCCTCGTTCATACCCAGGTCTCCAGTTCAACAGTATCCCTACTTTTCGTGGCGGCAGAAGGGGGATTGTCTGTCCAGTACAAAGGCACGTTTGTATGAATCCAAACCACTCAAGGAGCAAGGAATTAGAAAGTCGCTATCACAGATATCGCTGGACGAAAGAAAAGCAAAGAAAGCAAGTCGTAAGAATTTTACGTGGAAACGAGATGTATCAGGTACCACAGCGGAAGGAAAGAGTTTGAAAACTACGCATGACAGCAAAGTGAACAAAGTAGAAGCGAATGAACTCGAATCCAAAAGAGGATCTCAAGTTGTTAAAAATAGTCAGGCTACCGCCACGAGTCAGTCACGTGGAGAAGCAAAACCGACTAAGCACCAGTCATTGGTGGGTCCCAGGTCCATGACGAAATACACAGACAACGGAGAGAAGCCATTCGATAGCATTCCCTTTGACTTGGATCCGAGTACAACCTCTTACAGACTAAATCATACACCTCTTCAAAAATCTAATTCCACTTTGAACGCGTACGACACACCAAGCGTTGTAAGCCACGGTAACACGTCCCTGATTAACGGTCGTCAGTCCCCAGTCTATCTTGCCGTCCCTGTAGACCGGCCTCCAATGAAAGTGAAGCTCAAAAGCCGCGCGTTTGAGCAGGACATGTCAGACATTGCCACAATCAACAAGCTCAGAAGCAAACTGACAAATGCCGACCACTTGGGAACATTGATAACTCATCCTGCAGAGAAGGGACTTGAAGAGGATGGACCCATTTCTGGTGATTGTAAGAGACCTATAACTCATCATAACGAAGGTTCCAAAGCCCCCAAGAATCATGAGCCAGGAATGGCTCAAATTGCTAAGGGACGTGGAGAGGATAGTGCTATTTCGGACGACTCTCGTGAGCCCACAACTCGTCTTAAGGCAGCGGGCAATCTCCCTAAGAATCAAGAACTTGGGACTGCGGCATCAAAGATCTCCCTGACATTTCAGTCTAATTGTTCTGTGCCACCTCAAGAACAAAACCTTTCACCGCCACAAAAGTCCGCTGTGTTCCCTCCTCAGTTAAAGAATTTCTTTAGATCCTACGGTCCATCAAATAGATGATAAATTCCTTGGCTACTTCACCGCGTTTCGGACGGCTGGCGCATGAGTACGGAAAAAAGAACAGCGATTATGATAATACTGAAAGGAAGGACGCCCTCTGTTCCGCTTAAACATATTGAGAGACTGTAAATGATATCGAATGATCCAACAACTTAATCCTTCATGGAATGTTCGTTTGCGCGAAGCCGAAGCTTCGGAATTCCGAACCCGACGTCGAAACGTTTTCTTCGGAGAGAGCTCCTGCAAAAAACATTCGGCAAGGACACCATTCGATGTTTTTATGTAAAGCAACCAGTTCGTGATTTCTCTCACGTGTTAATCGACCATGTTAAATGTTCAATTCCCAGAGAGCTGCTTTCGGGGCACCAGCATAGCACTGGGCCCGTCCCGTCCTTTTGGTGCCAAAGATTAGGCTTTGAAGTGAAAGGTAGCAGAATGTTTTTTGCATCCGTGCTGTCATGCATATCTCTTATGCGATCGACAAAGGTCCCAAAAACAAATGAGTATATATTTTTAGGTTTGCAGAAAATTTTTTTGGAATGTTCTTTTTGCACGTGAGTAAATTTAGTGAGTGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CDK2	Cytosolic carboxypeptidase 2 OS=Mus musculus OX=10090 GN=Agbl2 PE=1 SV=1
Q4R632	Cytosolic carboxypeptidase 2 OS=Macaca fascicularis OX=9541 GN=AGBL2 PE=2 SV=1
Q5U5Z8	Cytosolic carboxypeptidase 2 OS=Homo sapiens OX=9606 GN=AGBL2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001479 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00246 all species →	Peptidase_M14	Zinc carboxypeptidase	Domain	Interproscan
PF18027 all species →	Pepdidase_M14_N	Cytosolic carboxypeptidase N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000834 all species →	Domain	Peptidase M14, carboxypeptidase A	Interproscan
IPR050821 all species →	Family	Cytosolic carboxypeptidase	Interproscan
IPR040626 all species →	Domain	Cytosolic carboxypeptidase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12756 all species →	CYTOSOLIC CARBOXYPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004181 all species →	Molecular Function	metallocarboxypeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23437	AGBL2_3, CCP2_3; cytosolic carboxypeptidase protein 2/3	EC:3.4.17.-	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.