Detailed information of agem_s0095.g30.t2 in Acropora gemmifera

Genomic Location: sc0000095_pilon:403716...423526
NR annotation: XP_044184372.1, dynein intermediate chain 3, ciliary-like isoform X2 [Acropora millepora]
Species Acropora gemmifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q16960Dynein intermediate chain 3, ciliary OS=Heliocidaris crassispina OX=1043166 PE=2 SV=1
Q9GZS0Dynein axonemal intermediate chain 2 OS=Homo sapiens OX=9606 GN=DNAI2 PE=1 SV=2
Q4QR00Dynein axonemal intermediate chain 2 OS=Xenopus laevis OX=8355 GN=dnai2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006856 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for agem_s0095.g30.t2. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050687
all species →		FamilyDynein Intermediate ChainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12442
all species →		DYNEIN INTERMEDIATE CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003341
all species →		Biological Processcilium movementInterproscan
GO:0007018
all species →		Biological Processmicrotubule-based movementInterproscan
GO:0036157
all species →		Cellular Componentouter dynein armInterproscan
GO:0036158
all species →		Biological Processouter dynein arm assemblyInterproscan
GO:0045503
all species →		Molecular Functiondynein light chain bindingInterproscan
GO:0045504
all species →		Molecular Functiondynein heavy chain bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for agem_s0095.g30.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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