Detailed information of agem_s0095.g51.t1 in Acropora gemmifera

Genomic Location: sc0000095_pilon:687178...704598
NR annotation: XP_044174931.1, X-ray repair cross-complementing protein 6-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O93257X-ray repair cross-complementing protein 5 OS=Gallus gallus OX=9031 GN=XRCC6 PE=2 SV=1
P12956X-ray repair cross-complementing protein 6 OS=Homo sapiens OX=9606 GN=XRCC6 PE=1 SV=2
P23475X-ray repair cross-complementing protein 6 OS=Mus musculus OX=10090 GN=Xrcc6 PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02037SAPSAP domainDomainInterproscan
PF03730Ku_CKu70/Ku80 C-terminal armFamilyInterproscan
PF02735KuKu70/Ku80 beta-barrel domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027388Homologous_superfamilyKu70, bridge and pillars domain superfamilyInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR003034DomainSAP domainInterproscan
IPR047087DomainKu70, core domainInterproscan
IPR005160DomainKu70/Ku80 C-terminal armInterproscan
IPR006165FamilyKu70Interproscan
IPR006164DomainKu70/Ku80 beta-barrel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12604KU AUTOANTIGEN DNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0043564Cellular ComponentKu70:Ku80 complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01867WARS, trpS; tryptophanyl-tRNA synthetaseEC:6.1.1.2
Transfer RNA biogenesisko03016deepkoala

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