Gene detail

Detailed information of agem_s0096.g13.t1 in Acropora gemmifera

Genomic Location: sc0000096_pilon:150355...160595
NR annotation: XP_044176737.1, uncharacterized protein LOC122959480 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

agem_s0096.g13.t1

ATGACAAAAACTGGTTTGGCCTTTTCTGGAGGCGGTATTCGGTCCGCGGCACTCTGCTCTGGTGTCCTGCGCAGACTGTTACACAAAAATGTCGTCCCAGACTACCTAAGCTGCGTTTCCGGGGGTGGTTACACAGGTACTGCTTACTTGGACTGGAAATATCGCAACGAGCGAAAGGATGACCCAACGTGGCATAAGGAGTTCTTTGACAGCATGCGCAAGAGGGTTGGATATCTCTGTGACTGGCAGAATCCTTTGCAAGGACTTGTAGACGCATTTTCCATTGTGATTATTGTTGTACTTCTTTCCATCATCTTTCCTTTCATTAACTGGTTTAGTTACGCCTTGCCAACAGCTTATATCGTCGATCATTTGTTCGGCGAAATGCTGCGAGGGTCGTTCACATGTCCAGATTCGAAAACTCACAATTTCACTTCATCTGAAATTGCTGAAAACCCGGAGGTGTCCAACTTTGTCAACAAGACTAAGGAAAAAGAATGCTTTCTCAAATTAGGGCCAGGGTTGTATTTAGCCGTCGAGGAATTCGGCCTTTTTTTCATTGGTTTCTTTCTCTTGTTTGTGATCAAGACCTTGGCTGGTCATTCTCTAAGACCGTTGGCCACTGTTCTGTTTAATATCACAGGGTTCACCTTGGCAATGACGTTTCTGCCTTGGTTTATTGAACAATTCATTGTTTTCACGCCCATGTGGCTCAACGTCCTTTTACTTGTTCTAAGTATTTTCTTGTGGCTGGGCATACCTCCCCTCAGAGACAAAGCATGTTTAGCTATTGTCTTTTACATCTACGCTTACGTTGTCAAGTGGAGAGTTTATAAGACAGACGTACTGTCTATAGCCTACACGGACAGCTTGTTCAATATCCTGTTATGGATTTCTGGAATTTTGATATGGATAAGACCCCTGTTTATTATATCACAGCAGAGTCTTCTTCATGCATACAACAGGTGGCGCTTACAGAAAGCCTTTTACTCACCCGAGAGCAGAGCATCGTCAAGTTTCTTGGAAATCGCTTGTCATACTGCGTTTCCTTCATTTACCTGTTGCAAGGGAACGGCCGAGAGCATAAATCGACCATTGACTTTAAGAGATCTTTCTGGTTTAGCACCAGAATGTATCTGTAACGTGACAGTGAATCATTGGAGACTGCAGAATTCACAAAGAGAGCCAACGTTTGAACCCCTAACAATGTCACCCTCAAGGATCGAAACCATCGTTAACGAAGTAGAAGAGAAACAATTTGAAAACCGACTACACCCGGAAGATATAGAGCTATCAGAAGCCATGGCGACCTCTGCTGCCGCGCTTTCGTATCACATGGGTAGATATGACATTGCATTTGAAGTCTTTGATGACTTGCAGGTTATACTCGGACTGGGCTTTGGAAAATCCATCGTAGCAGAGAAGAAAAAATGGACCCGGCCGTGTTTTAAGGTGATGACCGTCGTCATTCAACTTGTTTTCGGGTTTCCGATATTATTGCTTCCCATGATTCCGTATCTGGGTGGCAGCGAGTACTGGAACCGAATAGCCGTGATTTCCTTTTTGGCAATCTTTTTTTTGCTCCTGTTGATTGCAGTGATGCCGACGGGAGCGGAAAATCCCGGATTTTGGGAAACATTTGTCAGATGGTGTATCGTACATGTCTTTCAAGTAAGATTCATTAGAGAACATTTGGGAGTTGTCAATGTTGGCCCCACTCCTCCTCCAATCCTGTATTTGAGTGATGGCGGACACGCTGAAAATCTCGGCATTTTACCTCTGTTGAAAAGAAAATTAGAGAAAATTGTTGTTATCAATGCTGGCGTTGTAAATGAACGTTTAGGACTCGCTCACTCTCTTTTCCATGCGTTGAACCAAGCGCGAAATAAACTTCACTGCTCGTTTACTGCACTGGACGGAGGAGACATAACTAGCAACATAAGGGCAATGATCGTCGATGTACCGTCGGGCAAGCATCCGAGGAGTTTCCGATTCAAAGTTCAATATTTCGATTTTAAAGACGATGACTGTCCGGACCAAATGGTCGGGGAGGGAGAAATTTTATATCTTCTCCCGCGCCACCCTCAACTCGGTCTTTCAGAACAGAGCAGTAACTGGCACGACCTAGCAGATGACGTCAATATTGATATCGAGGCTGATTTATGGGGGCTTGGTCCCAATGTAGAATCTAAAGAAGTAGACAGTTTAACTTGTGGCTGTTGTGAATGCTGTCACGTTTACGCGCTTCATCATTTATCTGGGTCGTGTTGTGGCGTGTTTCCCAATCATATCACTGCAAATCAATTCTTCACACCCGCCATGTTCAGTGCCTATCATCGGGAAGGATACCATGCCTGCATGGAAGGCCTAGCTGCTGAGTTCCTTGGTTGCTCTATGAACGAATAA

Transcript

agem_s0096.g13.t1

CGAAGAAAGGTTTCATCGCCCAAAGAGACACAAAGAAGATATGACAAAAACTGGTTTGGCCTTTTCTGGAGGCGGTATTCGGTCCGCGGCACTCTGCTCTGGTGTCCTGCGCAGACTGTTACACAAAAATGTCGTCCCAGACTACCTAAGCTGCGTTTCCGGGGGTGGTTACACAGGTACTGCTTACTTGGACTGGAAATATCGCAACGAGCGAAAGGATGACCCAACGTGGCATAAGGAGTTCTTTGACAGCATGCGCAAGAGGGTTGGATATCTCTGTGACTGGCAGAATCCTTTGCAAGGACTTGTAGACGCATTTTCCATTGTGATTATTGTTGTACTTCTTTCCATCATCTTTCCTTTCATTAACTGGTTTAGTTACGCCTTGCCAACAGCTTATATCGTCGATCATTTGTTCGGCGAAATGCTGCGAGGGTCGTTCACATGTCCAGATTCGAAAACTCACAATTTCACTTCATCTGAAATTGCTGAAAACCCGGAGGTGTCCAACTTTGTCAACAAGACTAAGGAAAAAGAATGCTTTCTCAAATTAGGGCCAGGGTTGTATTTAGCCGTCGAGGAATTCGGCCTTTTTTTCATTGGTTTCTTTCTCTTGTTTGTGATCAAGACCTTGGCTGGTCATTCTCTAAGACCGTTGGCCACTGTTCTGTTTAATATCACAGGGTTCACCTTGGCAATGACGTTTCTGCCTTGGTTTATTGAACAATTCATTGTTTTCACGCCCATGTGGCTCAACGTCCTTTTACTTGTTCTAAGTATTTTCTTGTGGCTGGGCATACCTCCCCTCAGAGACAAAGCATGTTTAGCTATTGTCTTTTACATCTACGCTTACGTTGTCAAGTGGAGAGTTTATAAGACAGACGTACTGTCTATAGCCTACACGGACAGCTTGTTCAATATCCTGTTATGGATTTCTGGAATTTTGATATGGATAAGACCCCTGTTTATTATATCACAGCAGAGTCTTCTTCATGCATACAACAGGTGGCGCTTACAGAAAGCCTTTTACTCACCCGAGAGCAGAGCATCGTCAAGTTTCTTGGAAATCGCTTGTCATACTGCGTTTCCTTCATTTACCTGTTGCAAGGGAACGGCCGAGAGCATAAATCGACCATTGACTTTAAGAGATCTTTCTGGTTTAGCACCAGAATGTATCTGTAACGTGACAGTGAATCATTGGAGACTGCAGAATTCACAAAGAGAGCCAACGTTTGAACCCCTAACAATGTCACCCTCAAGGATCGAAACCATCGTTAACGAAGTAGAAGAGAAACAATTTGAAAACCGACTACACCCGGAAGATATAGAGCTATCAGAAGCCATGGCGACCTCTGCTGCCGCGCTTTCGTATCACATGGGTAGATATGACATTGCATTTGAAGTCTTTGATGACTTGCAGGTTATACTCGGACTGGGCTTTGGAAAATCCATCGTAGCAGAGAAGAAAAAATGGACCCGGCCGTGTTTTAAGGTGATGACCGTCGTCATTCAACTTGTTTTCGGGTTTCCGATATTATTGCTTCCCATGATTCCGTATCTGGGTGGCAGCGAGTACTGGAACCGAATAGCCGTGATTTCCTTTTTGGCAATCTTTTTTTTGCTCCTGTTGATTGCAGTGATGCCGACGGGAGCGGAAAATCCCGGATTTTGGGAAACATTTGTCAGATGGTGTATCGTACATGTCTTTCAAGTAAGATTCATTAGAGAACATTTGGGAGTTGTCAATGTTGGCCCCACTCCTCCTCCAATCCTGTATTTGAGTGATGGCGGACACGCTGAAAATCTCGGCATTTTACCTCTGTTGAAAAGAAAATTAGAGAAAATTGTTGTTATCAATGCTGGCGTTGTAAATGAACGTTTAGGACTCGCTCACTCTCTTTTCCATGCGTTGAACCAAGCGCGAAATAAACTTCACTGCTCGTTTACTGCACTGGACGGAGGAGACATAACTAGCAACATAAGGGCAATGATCGTCGATGTACCGTCGGGCAAGCATCCGAGGAGTTTCCGATTCAAAGTTCAATATTTCGATTTTAAAGACGATGACTGTCCGGACCAAATGGTCGGGGAGGGAGAAATTTTATATCTTCTCCCGCGCCACCCTCAACTCGGTCTTTCAGAACAGAGCAGTAACTGGCACGACCTAGCAGATGACGTCAATATTGATATCGAGGCTGATTTATGGGGGCTTGGTCCCAATGTAGAATCTAAAGAAGTAGACAGTTTAACTTGTGGCTGTTGTGAATGCTGTCACGTTTACGCGCTTCATCATTTATCTGGGTCGTGTTGTGGCGTGTTTCCCAATCATATCACTGCAAATCAATTCTTCACACCCGCCATGTTCAGTGCCTATCATCGGGAAGGATACCATGCCTGCATGGAAGGCCTAGCTGCTGAGTTCCTTGGTTGCTCTATGAACGAATAATTTCAGTTTCAAAGTAACATTGATATTCTCTAAAACGAAAAATAAAGAGGAAATCATCAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR016035	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10728	CYTOSOLIC PHOSPHOLIPASE A2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004623	Molecular Function	phospholipase A2 activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0046475	Biological Process	glycerophospholipid catabolic process	Interproscan