Detailed information of agem_s0102.g5.t2 in Acropora gemmifera

Genomic Location: sc0000102_pilon:66256...83175
NR annotation: CAH3132502.1, unnamed protein product [Porites lobata]
Species Acropora gemmifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B5X4E0Calumenin-B OS=Salmo salar OX=8030 GN=calub PE=2 SV=1
B5X186Calumenin-A OS=Salmo salar OX=8030 GN=calua PE=2 SV=1
Q7SXV9Calumenin-B OS=Danio rerio OX=7955 GN=calub PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000528 (this species only)

 Pfam domain
No Pfam domain signature was detected for agem_s0102.g5.t2. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10827
all species →		RETICULOCALBINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23901CALU; calumenin-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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