Detailed information of agem_s0103.g24.t1 in Acropora gemmifera

Genomic Location: sc0000103_pilon:544473...562014
NR annotation: XP_029212504.2, LOW QUALITY PROTEIN: trans-L-3-hydroxyproline dehydratase-like [Acropora millepora]
Species abbreviation AGEMM · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66II5Trans-L-3-hydroxyproline dehydratase OS=Xenopus tropicalis OX=8364 GN=l3hypdh PE=2 SV=1
Q5RC28Trans-L-3-hydroxyproline dehydratase OS=Pongo abelii OX=9601 GN=L3HYPDH PE=2 SV=1
Q96EM0Trans-3-hydroxy-L-proline dehydratase OS=Homo sapiens OX=9606 GN=L3HYPDH PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004467 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05544
all species →		Pro_racemaseProline racemaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008794
all species →		FamilyProline racemase familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33442
all species →		TRANS-3-HYDROXY-L-PROLINE DEHYDRATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016836
all species →		Molecular Functionhydro-lyase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01777prdF; proline racemaseEC:5.1.1.4
D-Amino acid metabolismko00470deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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