Detailed information of agem_s0104.g100.t1 in Acropora gemmifera

Genomic Location: sc0000104_pilon:1832200...1862330
NR annotation: XP_029194987.2, hapless 2-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7SIM4Hapless 2 OS=Nematostella vectensis OX=45351 GN=HAP2 PE=1 SV=1
Q8CCP0Ribosome quality control complex subunit NEMF OS=Mus musculus OX=10090 GN=Nemf PE=1 SV=2
O60524Ribosome quality control complex subunit NEMF OS=Homo sapiens OX=9606 GN=NEMF PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10699HAP2-GCS1Male gamete fusion factorDomainInterproscan
PF11923NFACT-CNFACT protein C-terminal domainDomainInterproscan
PF05670NFACT-R_1NFACT protein RNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051608FamilyRibosome Quality Control Complex Subunit NEMFInterproscan
IPR018928DomainGenerative cell specific-1/HAP2 domainInterproscan
IPR021846DomainNFACT protein, C-terminalInterproscan
IPR008532DomainNFACT, RNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15239NUCLEAR EXPORT MEDIATOR FACTOR NEMFInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan
GO:0072344Biological Processrescue of stalled ribosomeInterproscan
GO:1990112Cellular ComponentRQC complexInterproscan
GO:1990116Biological Processribosome-associated ubiquitin-dependent protein catabolic processInterproscan

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