Gene detail

Detailed information of agem_s0104.g75.t1 in Acropora gemmifera

Genomic Location: sc0000104_pilon:1377061...1381726
NR annotation: XP_029194997.2, LOW QUALITY PROTEIN: probable serine/threonine-protein kinase PBL1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0104.g75.t1

ATAAGGTTCTGTGGCGTAAGCCTACTATTTCTGTAGATTACGAGTCAACTAGTTGTTAATAGCAATGGGAAACGCTTCTTCTGTCGAAGAGATAAAGTTAGGAGATAAAATTGGCGAAGGTTCGTTTGGAGAAGTTTTTAAGGCGGTGTGGTGTGGAAAGCATGTAGCCGCTAAACGAATTCACGCTGTCTTCTTTGAAGGCGATCGCGATGGAAGCATGCGGGAAAGATTCATGCAGAGACATAAATCAGAATGGGAGCTACTCAGCAGCCTTAATCATCCCAATATTGTGCAATATTACACAATGATTTTACCTCCAATCCCAAAGTCACCGATCATCGTAACCGAGTTGCTAGAATGTGACTTGGAGAAGCACATTCAACAATCGGAGAGCAAACCGAAAGTACCTTTTTCGGACGTCGTCAAAATCATGTTAGACGTTGCAGAGGGTTTGCAGTATCTACATTCTCTTAAGGAGCCTATCGTACACCGCGATTTGGCGAGCAAAAACATCCTTCTAACGAAGAAGTTGCACGCGAAGATTGCTGATTTGGGATTGGCAAAGATTTTTCCAAATGGTGCGATGTTTGCTACAGTTGTGCCGGGGACACCGGTATATGCAGCTCCAGAAACCTACCCCAGTATAACTGGAAGAGGAAGACAGCGCGGAGAAGCGATCTATAGAGAGAAAGTCGACATATTTTCCTTTGGTGCTGTAATGCTGGAGACCATCATTGGCCATCTACCTGAACGGGCCTTACCCGACCCGGTTCTCGAAGACGGGGAAATTATTCCGGAATATATTCGGCGAAGCGAAGATCTTGAAGAAATGGGACCTGACCATCCTCTCCACAATCTTGTTTGCCAGTGTTTTGAAAACAATCCCGAGAAAAGACCGATTGCGGATAAACTTGTGGACACTCTGAGACAATTTTGCAACAGCAAGATCTCTGGAGGCAATAAAGTCGGGAAGGTCGAGAGCATGCCACCCATTCACTTTGATCACAAATTCAAGATTTTAGTTCTTGGCGAGTCCGGCGTTGGAAAAACTTCCATTCTTTCTCGTTTCCTAGACCCCAATTGTCCTTTTCCTGATGTACCAGCTCCGGTCACCATCGAGACTGAAGATCACTTCCAAAGGCTTCGCTTCCGAAACAAGTCTGTCAGTCTTCATCTTGTGGATGTTGGGGGCCACAATTTCAACCCAGCGGCCAACTGCGTGCCGCAGATATTTCGTTGCGTCCAGGGTGCGATCATTGCGTTTGATCTCACCTCGCAAGTGTCTTTCTTGGAAGTGTCTAAGTGGTTAGACTTTGTGAAGGAGAGATGCCATGAACAAGTGCCTGTCGTACTCGTTGGAAACAAAAGCGACGAAGCGGAGAGATGGGTTGACTCGATGAAAGTGAAAGACCTTGAATCCAAGCAAAGCTTGTTTTACATTGAGGCCAGTGCAAAATCTCGAGAAAATATCGATGAAATATTCTCCGTTCTTGTGGATTTAATGATCGAACAAGAAAATCTACAGGAGTCTTCTCCGGGGGTGGCGAATACACTTCTTTCTTCTCTACAAACGACACTTTCTAAAAGCGATGTTTTAGAGAAGAAGTTGATTGCTGAACTCCAAAAATCTCCTCGTCGTGAGCTTCTTGGTCCAGATGTGATTGTTTTGGAGGAAGCGGGCCCCACAGCCGCAAAATCAGGCGACGCACAGGAATCTAATACGAGCGAGAAACATAAGTGTTGCATATTGATGTGACTTTGTAAATGAATATGAAGAAAAGTTTGAAATACCAGACGAAGCTGCATCCTTGGACACGAAATTTTCAAAGAGATGAATTCAACCCCAAGCGATATTTCATTTTGTAGGTTCTGATTTTGTGCTCGCCCTTTTTCCTCTTCTAGTAACAGGAATTTTGAACGCGGTAGAATAATTCCGATGTACTTTAGCTGGCACAAAATAATCAAAGGTGGCGCGGGCTTTCACAAGATATACACCGTGATACaatgggacctatgaagctgagcggtcacgtggttcaaaaccaccaaactggtgagcaaatgacgcagtgggacatgttaaacaaagaaaagtcaaatttggtg

Protein

Uniprot

Uniprot term	Description
Q54H46	Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum OX=44689 GN=drkA PE=3 SV=1
Q7T6X2	Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R826 PE=3 SV=2
Q86HG9	Probable serine/threonine-protein kinase DDB_G0271682 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0271682 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR051681	Family	Serine/Threonine Kinases and Pseudokinases	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44329	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan