Gene detail

Detailed information of agem_s0107.g33.t1 in Acropora gemmifera

Genomic Location: sc0000107_pilon:560800...570266
NR annotation: XP_015767742.1, PREDICTED: tyrosine-protein phosphatase non-receptor type 11-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

agem_s0107.g33.t1

TTGTAAGTAGTGTAATTTGATCTTTTATTTTAATTAATGTATGTATATGTATTTTGACCATAGTCGAGTGGCTTTAAAAGACTGTGACCCGAATGTGGTTGGATCCGATTACATCAATGCAAATTTTGTTGGGGGCAGTGATAGTGATGACTCTCCCAAACGGTACATTGCTGCCCAAGGCTGCCTTCCAAGCACTGTTGAAGATTTCTGGAGAATGGTTTTTCAGGAGAACAGCAGAATCATTGTCATGACAACAAAAGAAGTAGAAAGGGGAAGGAACAAGTGCACACGCTATTGGCCTGATCCAGATACAACAAAGGACATATCTACTTTCCATGTCAGATACCTAAAAGAATTTGAATACAGTGATTATACACTAAGAGAGTTTGAACTGACATCGGAAACCAATCCAATCCCTCGCACTATTTATCAGTTCCATTATACTGGCTGGCCTGATCATGGCGTTCCTAAGGATCCAAGCCCTGTCTTAAATATTCTCCATGAAGTTAATGCGAGACAACAGTCAATCCCTTCAGCTGGACCAATCATAGTGCATTGCAGTGCTGGAATTGGGAGGACTGGTACATTCATTGTGATTGATACCCTGATCAACATGATCAAAGAGCAAGGTCTTGACTGTGAAATTGATATTTCTAAAAGCATTCAGATTGTGAGAGCTCAGAGGTCTGGCATGGTGCAAACAGAGGCACAGTATGAGTTCATTTACAAAGCCATTCAGCATTACATCAGCACAGAAACTGCAAGACTGAATAGTGACAATCCCAACCTAGCAGTGTATGGCAATTTGGCCAATGTGAGGAAAAATGGAGAAACAGAGATCCCTCCCCCAATTCCTATGTATCAGCCAGCAGACAAATGTTCAAAACCTGCAAAGAGAGAAGAATCATTCAAGTCTCCACACATGCCACCCCGCCTTGGTGAGGGACCACCGCCTCCTCTTGCGCCAAGAAAATCTGGTAAAATATGAGAGGAATTGGCCAGTGCGTCAAATGAAACATGGAATAAACAGTGAATATGGTGGAATGCACATAATTATGTCTACAGCTGTAGGCTAACTCCTCGTTTGGTCTTTACTTCCAACAATTAGACTGAAGTAAACAACTGTGTGTTTCTTAATCAATATCTTATCTGCATTCTTCTTTGGATTTTCAATGCCCAATTTCAGTTAAACACTGTAGAAGGGAAAGTGCTATGTAAAAATACTGCCAACCTACACTTGTAGCTTTGTTTTTCTTAATATTGTTACTTTCCTTCTTCTTGTTTATATTCTACCTCCACTTCAGTGGAAAAGTAATAGTTGATATAACATGACATTTCAATGTCATAAGTTATAGGACCACAGTTGTTCCCTAAATGGATGACTCCATCCAGTGATTATCTGTAAGATATTTGGTCAAGGTAGAACTTGATCTAATCAATTTGATGTGCCATTTACCCCTGCCAGTCTTGTGCACAACCCATATTTAGCATTGATTAGATCACGTCACCATTGGTTTTGTGAAGTAAAATACACTTTTTACATTGTATATGTAGATATTTTAAATGAATCTGACTTTAATAATCTTCATAGATTGTTTTCTAAAGATCTGTCTCCAACTAAACCCtaaatgcgttcgctcccaaggggtttgcccttgaggagtaaaatcgtatgccattagagtgtaaaatctagtgtcagtggcactgtgaagagtgaaagggtcagtgaaagtactagGATAGCTGATGTTTCCTGAGATGTTGTTCCTGGGCTTTAAAATATTATTCCAGTATTTCTTGCATAGGTCATTGGTCAGACTGTTTGTGCCTCACATTGGTTAAATTCAGAATGGTCCTTGGTCAAAGAAATGGCTTGCAGATCAGTTGTAAGAACAATAGTTGAAGATTTCCCAGAGATTATACCTAGTCAATGAAATAATAATTATTATTGTGATATTGACAAACATATTTCTGATTTTTTGCAAAGAAAAAGAATAGCAACAATTATTGTAATTTGGTCAATGTAAAAATATTGCAATACTTAGTTTTTAGTGAACCATTGATTACTGGGGAATGTTAGAATAAGAATTGATAGGATGCAAAGAAGAAGCTTTGTTGAAAAGCAACAGTATTATTTTTTTTGTCATGAAATGAAATGCAGACATTACATTATGATGGACTTGTAGATCAAGAGAATCCAGAATCATCAGAAGAGAAATAAAGTTTTGATATAACTATGTTTCTTAGCGTTTTTAGGAATTTTCAGCTGGTGAGAAATTTAGAGTCAAATTGAGTAAGATAGGGTGCCTTTTGCACCGAAGTTATTTTATTTTATATTGGGTACTGTCTGAATATTATTGGTTCTGTTTTTGTACTTACTCTAATAGTACTTACACTAAAAGGAGTCTAATAATAGAACATGTGCTTGATAATAAACTCAGACTAACAAATACAAATATGATTACCTAAGTAACAAGAGTCAAACAATAGATATGTTTATATAAATAATGGCCAGTAATAAAACAGTACCTAATAA

Protein

Uniprot

Uniprot term	Description
Q90687	Tyrosine-protein phosphatase non-receptor type 11 OS=Gallus gallus OX=9031 GN=PTPN11 PE=2 SV=1
Q06124	Tyrosine-protein phosphatase non-receptor type 11 OS=Homo sapiens OX=9606 GN=PTPN11 PE=1 SV=3
P35235	Tyrosine-protein phosphatase non-receptor type 11 OS=Mus musculus OX=10090 GN=Ptpn11 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR052123	Family	Non-receptor Tyrosine Phosphatase	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46257	TYROSINE-PROTEIN PHOSPHATASE CORKSCREW	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0000278	Biological Process	mitotic cell cycle	Interproscan
GO:0001784	Molecular Function	phosphotyrosine residue binding	Interproscan
GO:0004726	Molecular Function	non-membrane spanning protein tyrosine phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0035335	Biological Process	peptidyl-tyrosine dephosphorylation	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan