Detailed information of agem_s0118.g2.t2 in Acropora gemmifera

Genomic Location: sc0000118_pilon:23766...29398
NR annotation: XP_015754205.1, PREDICTED: TAR DNA-binding protein 43-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13148TAR DNA-binding protein 43 OS=Homo sapiens OX=9606 GN=TARDBP PE=1 SV=1
Q5R5W2TAR DNA-binding protein 43 OS=Pongo abelii OX=9601 GN=TARDBP PE=2 SV=1
Q28F51TAR DNA-binding protein 43 OS=Xenopus tropicalis OX=8364 GN=tardbp PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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